Variant report

Variant rs9535807
Chromosome Location chr13:52531245-52531246
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:52488200-52542200 Weak transcription Brain Cingulate Gyrus brain
2 chr13:52492600-52539600 Weak transcription Fetal Brain Male brain
3 chr13:52494400-52558000 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr13:52501000-52550400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
5 chr13:52501600-52532400 Strong transcription HepG2 liver
6 chr13:52504200-52533600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr13:52504600-52537000 Weak transcription Rectal Smooth Muscle rectum
8 chr13:52505600-52531800 Strong transcription Liver Liver
9 chr13:52508000-52532200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr13:52509200-52549800 Weak transcription Brain Substantia Nigra brain
11 chr13:52509200-52553000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr13:52509400-52548600 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr13:52511800-52535800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr13:52512600-52544000 Weak transcription Brain Angular Gyrus brain
15 chr13:52513200-52553000 Weak transcription Placenta Placenta
16 chr13:52513400-52542000 Weak transcription Brain Inferior Temporal Lobe brain
17 chr13:52513400-52555400 Weak transcription Brain Hippocampus Middle brain
18 chr13:52516000-52531800 Weak transcription Fetal Kidney kidney
19 chr13:52516000-52548000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr13:52516600-52554000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr13:52516800-52555400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr13:52519400-52546000 Weak transcription Spleen Spleen
23 chr13:52520600-52553000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
24 chr13:52520800-52531400 Weak transcription Brain Anterior Caudate brain
25 chr13:52523800-52532800 Strong transcription Breast Myoepithelial Primary Cells Breast
26 chr13:52525200-52531400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr13:52525200-52550200 Weak transcription Fetal Brain Female brain
28 chr13:52525400-52531400 Strong transcription Fetal Intestine Small intestine
29 chr13:52525400-52553000 Weak transcription Ovary ovary
30 chr13:52528000-52543200 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr13:52528200-52532600 Enhancers Fetal Muscle Leg muscle
32 chr13:52528200-52532800 Strong transcription Stomach Smooth Muscle stomach
33 chr13:52528200-52536000 Strong transcription Adipose Nuclei Adipose
34 chr13:52528400-52540800 Weak transcription Lung lung
35 chr13:52528400-52544000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
36 chr13:52528600-52534000 Weak transcription Primary T regulatory cells fromperipheralblood blood
37 chr13:52528600-52534000 Enhancers Stomach Mucosa stomach
38 chr13:52528600-52534200 Weak transcription Primary T helper naive cells fromperipheralblood blood
39 chr13:52528800-52542200 Weak transcription Fetal Heart heart
40 chr13:52529000-52531400 Weak transcription Left Ventricle heart
41 chr13:52529000-52532600 Enhancers Rectal Mucosa Donor 29 rectum
42 chr13:52529400-52532000 Enhancers Gastric stomach
43 chr13:52529600-52533800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr13:52529600-52553000 Weak transcription Psoas Muscle Psoas
45 chr13:52529800-52531400 Enhancers Duodenum Mucosa Duodenum
46 chr13:52529800-52532600 Strong transcription Aorta Aorta
47 chr13:52529800-52537000 Enhancers Rectal Mucosa Donor 31 rectum
48 chr13:52529800-52539200 Weak transcription Right Ventricle heart
49 chr13:52529800-52541800 Weak transcription Skeletal Muscle Male skeletal muscle
50 chr13:52530200-52542000 Weak transcription Brain Germinal Matrix brain

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