Variant report

Variant	rs9576168
Chromosome Location	chr13:37662356-37662357
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs9547724	0.81[ASN][1000 genomes]
rs9576159	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9576161	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9576167	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9576170	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948975	chr13:37281203-38280430	Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:37659800-37663800	Weak transcription	Fetal Muscle Trunk	muscle
2	chr13:37660400-37663200	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
3	chr13:37660400-37666600	Enhancers	Primary monocytes fromperipheralblood	blood
4	chr13:37660600-37665200	Weak transcription	Fetal Muscle Leg	muscle
5	chr13:37661000-37662800	Enhancers	Primary B cells from cord blood	blood
6	chr13:37661400-37663200	Flanking Active TSS	Monocytes-CD14+_RO01746	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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