The 2.0 version of rSNPBase

Variant report

Variant rs9576696
Chromosome Location chr13:39582857-39582858
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:39571600-39583800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
2 chr13:39572200-39584600 Weak transcription Stomach Smooth Muscle stomach
3 chr13:39573400-39584800 Weak transcription K562 blood
4 chr13:39574600-39585000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr13:39577000-39584600 Weak transcription Left Ventricle heart
6 chr13:39579000-39585000 Weak transcription Gastric stomach
7 chr13:39580000-39584400 Weak transcription Primary hematopoietic stem cells blood
8 chr13:39580000-39584400 Weak transcription Dnd41 blood
9 chr13:39580200-39584400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr13:39580200-39584400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr13:39580200-39584600 Weak transcription Fetal Muscle Leg muscle
12 chr13:39580200-39584800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr13:39580200-39585000 Weak transcription Fetal Stomach stomach
14 chr13:39580200-39585000 Weak transcription NH-A brain
15 chr13:39580400-39584600 Weak transcription Fetal Brain Female brain
16 chr13:39580400-39585000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr13:39580400-39585000 Weak transcription Lung lung
18 chr13:39580600-39583200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr13:39580600-39584400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr13:39580800-39583000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr13:39580800-39583200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr13:39580800-39584400 Weak transcription H1 Cell Line embryonic stem cell
23 chr13:39580800-39584400 Weak transcription Fetal Lung lung
24 chr13:39580800-39584800 Weak transcription Primary hematopoietic stem cells short term culture blood
25 chr13:39580800-39584800 Weak transcription Colon Smooth Muscle Colon
26 chr13:39580800-39586200 Weak transcription Colonic Mucosa Colon
27 chr13:39581000-39583200 Weak transcription Adipose Nuclei Adipose
28 chr13:39581000-39584200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr13:39581000-39584400 Weak transcription iPS-15b Cell Line embryonic stem cell
30 chr13:39581000-39584600 Weak transcription H9 Cell Line embryonic stem cell
31 chr13:39581000-39584600 Weak transcription Primary T helper cells fromperipheralblood blood
32 chr13:39581200-39583400 Weak transcription Rectal Mucosa Donor 31 rectum
33 chr13:39581200-39583800 Weak transcription Liver Liver
34 chr13:39581200-39584400 Weak transcription Primary T regulatory cells fromperipheralblood blood
35 chr13:39581200-39584400 Weak transcription Fetal Kidney kidney
36 chr13:39581200-39584600 Weak transcription Skeletal Muscle Male skeletal muscle
37 chr13:39581200-39585000 Weak transcription Aorta Aorta
38 chr13:39581200-39585000 Weak transcription Fetal Muscle Trunk muscle
39 chr13:39581200-39585000 Weak transcription Thymus Thymus
40 chr13:39581400-39583400 Strong transcription Primary B cells from cord blood blood
41 chr13:39581400-39584200 Weak transcription Osteobl bone
42 chr13:39581400-39584600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr13:39581400-39584600 Weak transcription Fetal Adrenal Gland Adrenal Gland
44 chr13:39581400-39584600 Weak transcription A549 lung
45 chr13:39581400-39584600 Weak transcription HMEC breast
46 chr13:39581400-39584600 Weak transcription NHEK skin
47 chr13:39581400-39585400 Weak transcription Fetal Intestine Small intestine
48 chr13:39581600-39583200 Weak transcription Primary monocytes fromperipheralblood blood
49 chr13:39581600-39583200 Weak transcription Primary B cells from peripheral blood blood
50 chr13:39581600-39583200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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Last update: Aug 31, 2015