Variant report

Variant	rs9601203
Chromosome Location	chr13:79824974-79824975
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs7320046	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7321701	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73543925	1.00[EUR][1000 genomes]
rs73557952	1.00[EUR][1000 genomes]
rs73560568	1.00[EUR][1000 genomes]
rs73564694	1.00[EUR][1000 genomes]
rs7992682	1.00[EUR][1000 genomes]
rs9593388	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9601202	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv523536	chr13:79820126-79824974	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:79824400-79825000	Enhancers	HUES64 Cell Line	embryonic stem cell
2	chr13:79824600-79825000	Enhancers	ES-I3 Cell Line	embryonic stem cell
3	chr13:79824600-79825000	Enhancers	HUES6 Cell Line	embryonic stem cell
4	chr13:79824600-79825000	Enhancers	iPS-20b Cell Line	embryonic stem cell
5	chr13:79824600-79825200	Enhancers	iPS-15b Cell Line	embryonic stem cell
6	chr13:79824600-79825200	Enhancers	iPS-18 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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