Variant report

Variant	rs961206
Chromosome Location	chr7:103602004-103602005
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr7:103595750..103598275-chr7:103601030..103605742,5	K562	blood:
2	chr7:103600490..103602295-chr7:103627924..103630124,2	K562	blood:
3	chr7:103595815..103597776-chr7:103600906..103603016,3	K562	blood:
4	chr7:103599829..103601669-chr7:103601789..103603458,2	K562	blood:

Variant related genes	Relation type
ENSG00000189056	Chromatin interaction

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs10230291	0.90[CEU][hapmap]
rs10244615	0.90[CEU][hapmap];0.81[CHB][hapmap];0.84[JPT][hapmap];0.83[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10244625	0.90[CEU][hapmap];0.81[CHB][hapmap];0.83[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10245730	0.89[CEU][hapmap];0.81[CHB][hapmap];0.84[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10248644	0.98[ASN][1000 genomes]
rs10248660	0.90[CEU][hapmap];0.81[CHB][hapmap];0.83[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10253605	0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10261497	0.89[CEU][hapmap];0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10269319	0.80[CEU][hapmap]
rs10272734	0.96[YRI][hapmap]
rs10487180	0.90[CEU][hapmap];0.81[CHB][hapmap];0.84[JPT][hapmap];0.82[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10953399	0.90[CEU][hapmap];0.81[CHB][hapmap];0.84[JPT][hapmap];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11764507	0.88[CEU][hapmap];0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11767246	0.90[CEU][hapmap];0.81[CHB][hapmap];0.86[JPT][hapmap]
rs11772975	0.90[CEU][hapmap];0.81[CHB][hapmap];0.84[JPT][hapmap];0.83[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12666169	0.90[CEU][hapmap]
rs12666713	0.90[CEU][hapmap]
rs12666749	0.90[CEU][hapmap]
rs12669852	0.90[CEU][hapmap];0.81[CHB][hapmap];0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12672677	0.90[CEU][hapmap];0.81[CHB][hapmap];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13438204	0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17157799	0.81[CEU][hapmap];0.81[CHB][hapmap];0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17157868	0.90[CEU][hapmap];0.81[CHB][hapmap];0.82[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs28631585	0.84[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4483087	0.89[CEU][hapmap];0.81[CHB][hapmap];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs66718115	0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs68163058	0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6950391	0.89[YRI][hapmap]
rs6976337	0.96[YRI][hapmap]
rs73183793	0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs73185407	0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7794238	0.90[CEU][hapmap]
rs7794418	0.90[CEU][hapmap]
rs9632690	0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9918549	0.90[CEU][hapmap];0.81[CHB][hapmap];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:103598200-103602800	Weak transcription	Fetal Heart	heart
2	chr7:103599000-103604200	Weak transcription	K562	blood
3	chr7:103599000-103607800	Weak transcription	HepG2	liver

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