Variant report

Variant	rs9621073
Chromosome Location	chr22:31112796-31112797
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs11089471	0.98[AFR][1000 genomes]
rs9609079	0.80[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv915818	chr22:30708245-31346302	Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Weak transcription Enhancers Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	82 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:31103000-31112800	Weak transcription	Brain Hippocampus Middle	brain
2	chr22:31103200-31112800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr22:31103200-31112800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr22:31108800-31113200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr22:31112600-31113200	Enhancers	Muscle Satellite Cultured Cells	--
6	chr22:31112600-31113800	Enhancers	NHDF-Ad	bronchial
7	chr22:31112600-31114600	Enhancers	HMEC	breast
8	chr22:31112600-31117000	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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