Variant report

Variant	rs9633672
Chromosome Location	chr10:93625549-93625550
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:93583779..93585319-chr10:93624182..93625736,2	K562	blood:
2	chr10:93623670..93626355-chr10:93627411..93630158,2	MCF-7	breast:

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10881982	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11186698	0.87[ASN][1000 genomes]
rs11186705	0.89[ASN][1000 genomes]
rs11186708	0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11186716	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11186728	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12359353	0.88[ASN][1000 genomes]
rs1538831	0.88[ASN][1000 genomes]
rs1630388	0.88[ASN][1000 genomes]
rs1770469	0.88[ASN][1000 genomes]
rs1770474	0.89[ASN][1000 genomes]
rs1772187	0.88[ASN][1000 genomes]
rs2259094	0.88[ASN][1000 genomes]
rs2259287	0.90[ASN][1000 genomes]
rs2259659	0.88[ASN][1000 genomes]
rs2260773	0.88[ASN][1000 genomes]
rs2261029	0.83[ASN][1000 genomes]
rs2261035	0.88[ASN][1000 genomes]
rs3802649	0.87[ASN][1000 genomes]
rs41286942	0.85[EUR][1000 genomes]
rs4565819	0.81[ASN][1000 genomes]
rs7083959	0.88[ASN][1000 genomes]
rs7919191	0.81[ASN][1000 genomes]
rs9420573	0.88[ASN][1000 genomes]
rs9633689	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:117 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:93569200-93626800	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr10:93570800-93626000	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr10:93570800-93626000	Strong transcription	Dnd41	blood
4	chr10:93571000-93625800	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
5	chr10:93571200-93626400	Strong transcription	Monocytes-CD14+_RO01746	blood
6	chr10:93571400-93626400	Strong transcription	Liver	Liver
7	chr10:93571400-93626400	Strong transcription	Fetal Thymus	thymus
8	chr10:93572000-93626200	Strong transcription	Rectal Mucosa Donor 31	rectum
9	chr10:93572000-93626400	Strong transcription	Primary monocytes fromperipheralblood	blood
10	chr10:93572000-93626400	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
11	chr10:93572200-93625600	Strong transcription	Placenta	Placenta
12	chr10:93572200-93626400	Strong transcription	Primary B cells from cord blood	blood
13	chr10:93572400-93626000	Strong transcription	Breast Myoepithelial Primary Cells	Breast
14	chr10:93572400-93626000	Strong transcription	Primary B cells from peripheral blood	blood
15	chr10:93572400-93626000	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
16	chr10:93572400-93626200	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr10:93572400-93626200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
18	chr10:93572600-93626200	Strong transcription	Primary hematopoietic stem cells short term culture	blood
19	chr10:93572600-93626200	Strong transcription	Primary T helper cells fromperipheralblood	blood
20	chr10:93572600-93626200	Strong transcription	Adipose Nuclei	Adipose
21	chr10:93572600-93626600	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr10:93572600-93629000	Weak transcription	Stomach Mucosa	stomach
23	chr10:93572800-93626200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
24	chr10:93573000-93626200	Strong transcription	Duodenum Smooth Muscle	Duodenum
25	chr10:93584200-93626400	Strong transcription	Skeletal Muscle Female	skeletal muscle
26	chr10:93585400-93626200	Strong transcription	Skeletal Muscle Male	skeletal muscle
27	chr10:93591800-93626200	Strong transcription	Primary neutrophils fromperipheralblood	blood
28	chr10:93598400-93629000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
29	chr10:93599200-93629000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
30	chr10:93599600-93634600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
31	chr10:93605600-93625600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
32	chr10:93606400-93630200	Weak transcription	Esophagus	oesophagus
33	chr10:93608200-93625800	Strong transcription	HSMM	muscle
34	chr10:93608800-93627400	Weak transcription	Pancreas	Pancrea
35	chr10:93608800-93627600	Weak transcription	Gastric	stomach
36	chr10:93608800-93639200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
37	chr10:93608800-93643400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
38	chr10:93610600-93627600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
39	chr10:93612200-93627600	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
40	chr10:93613400-93627800	Weak transcription	Aorta	Aorta
41	chr10:93613600-93627400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
42	chr10:93615200-93626000	Strong transcription	HMEC	breast
43	chr10:93615400-93627000	Weak transcription	Fetal Intestine Small	intestine
44	chr10:93616800-93625600	Weak transcription	K562	blood
45	chr10:93617000-93626000	Strong transcription	Fetal Muscle Trunk	muscle
46	chr10:93618400-93639400	Weak transcription	Brain Cingulate Gyrus	brain
47	chr10:93618800-93625800	Weak transcription	Fetal Stomach	stomach
48	chr10:93619600-93625600	Weak transcription	Lung	lung
49	chr10:93620200-93627600	Weak transcription	Thymus	Thymus
50	chr10:93620600-93631000	Weak transcription	HepG2	liver

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