Variant report

Variant	rs964215
Chromosome Location	chr2:167608714-167608715
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10930241	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs1115408	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs1553756	0.86[AFR][1000 genomes]
rs2390429	0.90[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs2655827	0.81[AMR][1000 genomes]
rs2655837	0.81[AMR][1000 genomes]
rs34518941	0.86[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs4233809	0.81[AMR][1000 genomes]
rs4274612	0.90[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs7590350	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs906900	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes]
rs962091	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv529384	chr2:167143465-167958752	Enhancers Bivalent/Poised TSS Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv875375	chr2:167515013-167703912	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:167608400-167608800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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