Variant report
Variant | rs9659043 |
---|---|
Chromosome Location | chr1:67268516-67268517 |
allele | C/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs11208960 | 1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap] |
rs11589326 | 1.00[JPT][hapmap] |
rs11809759 | 1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap] |
rs17442592 | 1.00[JPT][hapmap] |
rs2147836 | 1.00[JPT][hapmap] |
rs2312591 | 0.95[YRI][hapmap] |
rs269395 | 1.00[JPT][hapmap] |
rs496070 | 1.00[JPT][hapmap] |
rs520717 | 1.00[ASN][1000 genomes] |
rs6702554 | 1.00[JPT][hapmap] |
rs6703322 | 1.00[JPT][hapmap] |
rs7535403 | 1.00[JPT][hapmap] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv869413 | chr1:67082512-67414286 | Weak transcription Strong transcription Enhancers Active TSS Genic enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 13 gene(s) | inside rSNPs | diseases |
2 | nsv830093 | chr1:67173594-67348264 | Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Strong transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 5 gene(s) | inside rSNPs | diseases |
No data |