Variant report

Variant	rs9672066
Chromosome Location	chr14:32745669-32745670
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10483402	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11156735	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12588434	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12588534	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12886552	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1951677	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1957642	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs34022200	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs34330292	0.80[EUR][1000 genomes]
rs6571503	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7144152	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7145895	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7159059	0.98[ASN][1000 genomes]
rs7161416	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs8019577	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs8020579	0.80[EUR][1000 genomes]
rs8021336	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3527777	chr14:32669175-32761850	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	esv3527778	chr14:32669175-32761850	Enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32742800-32752800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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