The 2.0 version of rSNPBase

Variant report

Variant rs967323
Chromosome Location chr1:67003458-67003459
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:66999000-67003600 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
2 chr1:67000000-67004800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr1:67000000-67005000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr1:67000000-67005400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr1:67000200-67006400 Weak transcription H9 Cell Line embryonic stem cell
6 chr1:67000400-67005000 Weak transcription Breast Myoepithelial Primary Cells Breast
7 chr1:67000400-67005200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr1:67000400-67008000 Weak transcription Lung lung
9 chr1:67000400-67022000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
10 chr1:67000800-67029800 Weak transcription Primary hematopoietic stem cells blood
11 chr1:67001000-67006200 Weak transcription HepG2 liver
12 chr1:67001000-67008000 Weak transcription Left Ventricle heart
13 chr1:67001200-67022000 Weak transcription Right Ventricle heart
14 chr1:67001400-67005400 Weak transcription Fetal Lung lung
15 chr1:67001600-67011000 Weak transcription Stomach Smooth Muscle stomach
16 chr1:67001800-67006000 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr1:67002000-67005600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr1:67002000-67010600 Weak transcription Pancreatic Islets Pancreatic Islet
19 chr1:67002200-67006400 Weak transcription Osteobl bone
20 chr1:67002400-67004200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr1:67002600-67006000 Weak transcription HUVEC blood vessel
22 chr1:67002600-67006400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr1:67002800-67004200 Weak transcription Brain Cingulate Gyrus brain
24 chr1:67002800-67004200 Weak transcription Fetal Heart heart
25 chr1:67002800-67004200 Weak transcription NHDF-Ad bronchial
26 chr1:67002800-67004400 Weak transcription Brain Angular Gyrus brain
27 chr1:67002800-67004800 Weak transcription Muscle Satellite Cultured Cells --
28 chr1:67002800-67004800 Weak transcription Brain Substantia Nigra brain
29 chr1:67002800-67005000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr1:67002800-67005200 Weak transcription NH-A brain
31 chr1:67002800-67008200 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr1:67003000-67003600 Active TSS Brain Anterior Caudate brain
33 chr1:67003000-67004200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
34 chr1:67003000-67004800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr1:67003000-67006200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr1:67003000-67012400 Enhancers Brain Hippocampus Middle brain
37 chr1:67003200-67003600 Enhancers Aorta Aorta
38 chr1:67003200-67003800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr1:67003200-67005400 Weak transcription Fetal Brain Female brain
40 chr1:67003400-67003600 Enhancers Brain Inferior Temporal Lobe brain
41 chr1:67003400-67004200 Weak transcription Fetal Brain Male brain
42 chr1:67003400-67004400 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
43 chr1:67003400-67004400 Weak transcription NHLF lung

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Last update: Aug 31, 2015