Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs17033827	1.00[AMR][1000 genomes]
rs17034329	1.00[EUR][1000 genomes]
rs56674411	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59197882	1.00[EUR][1000 genomes]
rs60027608	1.00[AMR][1000 genomes]
rs60449845	1.00[AMR][1000 genomes]
rs61332127	1.00[EUR][1000 genomes]
rs61357393	1.00[EUR][1000 genomes]
rs6739982	1.00[AMR][1000 genomes]
rs6744242	1.00[CEU][hapmap];0.81[YRI][hapmap];1.00[EUR][1000 genomes]
rs6757146	1.00[EUR][1000 genomes]
rs72896929	1.00[EUR][1000 genomes]
rs72896933	1.00[EUR][1000 genomes]
rs72896942	1.00[EUR][1000 genomes]
rs72905801	0.89[AFR][1000 genomes]
rs72907744	0.85[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73933994	1.00[EUR][1000 genomes]
rs73936543	1.00[AMR][1000 genomes]
rs73936563	1.00[AMR][1000 genomes]
rs73936571	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7566139	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv534389	chr2:67388428-68225338	Enhancers Active TSS ZNF genes & repeats Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	36 gene(s)	inside rSNPs	diseases
2	nsv1007345	chr2:67870225-67980094	Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Weak transcription Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv834250	chr2:67897722-68051532	Enhancers Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:67903600-67912200	Weak transcription	Skeletal Muscle Male	skeletal muscle

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