Variant report

Variant	rs9705863
Chromosome Location	chr2:56548920-56548921
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 237 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:232)

rs_ID	r²[population]
rs11053264	0.93[AFR][1000 genomes]
rs11829122	1.00[AFR][1000 genomes]
rs11829226	0.93[AFR][1000 genomes]
rs11829680	1.00[AFR][1000 genomes]
rs11830228	1.00[AFR][1000 genomes]
rs11830290	1.00[AFR][1000 genomes]
rs11830292	0.94[AFR][1000 genomes]
rs11830441	1.00[AFR][1000 genomes]
rs11830619	0.93[AFR][1000 genomes]
rs11830677	1.00[AFR][1000 genomes]
rs11831021	0.97[AFR][1000 genomes]
rs11831245	1.00[AFR][1000 genomes]
rs11831251	1.00[AFR][1000 genomes]
rs11831293	1.00[AFR][1000 genomes]
rs11831349	1.00[AFR][1000 genomes]
rs11831930	0.93[AFR][1000 genomes]
rs11831993	1.00[AFR][1000 genomes]
rs11832032	1.00[AFR][1000 genomes]
rs11832662	0.93[AFR][1000 genomes]
rs11833264	0.93[AFR][1000 genomes]
rs11833361	1.00[AFR][1000 genomes]
rs11833447	0.97[AFR][1000 genomes]
rs11833485	1.00[AFR][1000 genomes]
rs11833580	0.87[AFR][1000 genomes]
rs11833642	1.00[AFR][1000 genomes]
rs11833680	0.93[AFR][1000 genomes]
rs11833749	0.93[AFR][1000 genomes]
rs11834567	1.00[AFR][1000 genomes]
rs11834927	1.00[AFR][1000 genomes]
rs11835144	1.00[AFR][1000 genomes]
rs11835169	1.00[AFR][1000 genomes]
rs11835340	0.94[AFR][1000 genomes]
rs11835519	0.97[AFR][1000 genomes]
rs11835895	1.00[AFR][1000 genomes]
rs11835906	1.00[AFR][1000 genomes]
rs11835939	0.94[AFR][1000 genomes]
rs11836005	1.00[AFR][1000 genomes]
rs11836137	1.00[AFR][1000 genomes]
rs11836158	0.93[AFR][1000 genomes]
rs11836575	0.94[AFR][1000 genomes]
rs11836718	1.00[AFR][1000 genomes]
rs11837063	1.00[AFR][1000 genomes]
rs11837134	1.00[AFR][1000 genomes]
rs11837278	1.00[AFR][1000 genomes]
rs11837420	0.93[AFR][1000 genomes]
rs11837438	1.00[AFR][1000 genomes]
rs11837446	1.00[AFR][1000 genomes]
rs11837623	1.00[AFR][1000 genomes]
rs11837884	1.00[AFR][1000 genomes]
rs11837899	0.97[AFR][1000 genomes]
rs11837915	1.00[AFR][1000 genomes]
rs11838172	1.00[AFR][1000 genomes]
rs12099627	1.00[AFR][1000 genomes]
rs12099659	1.00[AFR][1000 genomes]
rs12099660	0.94[AFR][1000 genomes]
rs12819568	1.00[AFR][1000 genomes]
rs35317375	0.93[AFR][1000 genomes]
rs55657497	1.00[AFR][1000 genomes]
rs55681645	1.00[AFR][1000 genomes]
rs55699286	0.93[AFR][1000 genomes]
rs55703132	1.00[AFR][1000 genomes]
rs55714406	1.00[AFR][1000 genomes]
rs55825739	0.93[AFR][1000 genomes]
rs55840924	0.94[AFR][1000 genomes]
rs55877562	1.00[AFR][1000 genomes]
rs55952122	1.00[AFR][1000 genomes]
rs55959478	1.00[AFR][1000 genomes]
rs55967587	1.00[AFR][1000 genomes]
rs56049789	1.00[AFR][1000 genomes]
rs56071884	1.00[AFR][1000 genomes]
rs56090635	1.00[AFR][1000 genomes]
rs56094917	1.00[AFR][1000 genomes]
rs56098132	1.00[AFR][1000 genomes]
rs56103408	0.93[AFR][1000 genomes]
rs56120992	1.00[AFR][1000 genomes]
rs56150499	1.00[AFR][1000 genomes]
rs56159241	1.00[AFR][1000 genomes]
rs56177546	1.00[AFR][1000 genomes]
rs56188823	1.00[AFR][1000 genomes]
rs56198086	0.97[AFR][1000 genomes]
rs56205928	1.00[AFR][1000 genomes]
rs56207554	1.00[AFR][1000 genomes]
rs56234608	0.93[AFR][1000 genomes]
rs56237318	1.00[AFR][1000 genomes]
rs56242467	1.00[AFR][1000 genomes]
rs56246626	0.97[AFR][1000 genomes]
rs56314587	1.00[AFR][1000 genomes]
rs56361480	1.00[AFR][1000 genomes]
rs56391397	1.00[AFR][1000 genomes]
rs56409370	1.00[AFR][1000 genomes]
rs56412601	1.00[AFR][1000 genomes]
rs56691041	0.97[AFR][1000 genomes]
rs56715199	1.00[AFR][1000 genomes]
rs56724983	1.00[AFR][1000 genomes]
rs56748402	1.00[AFR][1000 genomes]
rs56768224	1.00[AFR][1000 genomes]
rs56837577	1.00[AFR][1000 genomes]
rs56909132	1.00[AFR][1000 genomes]
rs56965441	1.00[AFR][1000 genomes]
rs57081134	1.00[AFR][1000 genomes]
rs57260754	1.00[AFR][1000 genomes]
rs57371390	1.00[AFR][1000 genomes]
rs57610337	1.00[AFR][1000 genomes]
rs57653554	0.93[AFR][1000 genomes]
rs57766387	1.00[AFR][1000 genomes]
rs57875495	1.00[AFR][1000 genomes]
rs57897263	0.88[AFR][1000 genomes]
rs58032451	1.00[AFR][1000 genomes]
rs58044216	1.00[AFR][1000 genomes]
rs58133367	0.94[AFR][1000 genomes]
rs58238273	1.00[AFR][1000 genomes]
rs58301692	1.00[AFR][1000 genomes]
rs58363858	1.00[AFR][1000 genomes]
rs58370767	1.00[AFR][1000 genomes]
rs58381871	1.00[AFR][1000 genomes]
rs58386990	1.00[AFR][1000 genomes]
rs58466974	0.93[AFR][1000 genomes]
rs58624224	1.00[AFR][1000 genomes]
rs58719590	0.91[AFR][1000 genomes]
rs58729422	1.00[AFR][1000 genomes]
rs58797991	1.00[AFR][1000 genomes]
rs58879230	1.00[AFR][1000 genomes]
rs58955776	1.00[AFR][1000 genomes]
rs59045211	0.86[AFR][1000 genomes]
rs59228021	0.88[AFR][1000 genomes]
rs59420328	1.00[AFR][1000 genomes]
rs59435656	0.88[AFR][1000 genomes]
rs59442403	1.00[AFR][1000 genomes]
rs59480955	1.00[AFR][1000 genomes]
rs59498608	1.00[AFR][1000 genomes]
rs59556442	1.00[AFR][1000 genomes]
rs59634197	1.00[AFR][1000 genomes]
rs59657845	0.94[AFR][1000 genomes]
rs59823325	1.00[AFR][1000 genomes]
rs59868168	1.00[AFR][1000 genomes]
rs60174931	1.00[AFR][1000 genomes]
rs60468949	0.91[AFR][1000 genomes]
rs60552369	1.00[AFR][1000 genomes]
rs60589496	0.88[AFR][1000 genomes]
rs60686453	1.00[AFR][1000 genomes]
rs60703540	1.00[AFR][1000 genomes]
rs60781148	0.93[AFR][1000 genomes]
rs60859229	0.94[AFR][1000 genomes]
rs61250726	1.00[AFR][1000 genomes]
rs61265571	1.00[AFR][1000 genomes]
rs61324351	1.00[AFR][1000 genomes]
rs61345959	0.97[AFR][1000 genomes]
rs61352041	1.00[AFR][1000 genomes]
rs61411066	1.00[AFR][1000 genomes]
rs61471632	1.00[AFR][1000 genomes]
rs61558270	0.94[AFR][1000 genomes]
rs61565811	1.00[AFR][1000 genomes]
rs61687260	1.00[AFR][1000 genomes]
rs74074113	1.00[AFR][1000 genomes]
rs74074118	1.00[AFR][1000 genomes]
rs74074123	0.94[AFR][1000 genomes]
rs74074130	1.00[AFR][1000 genomes]
rs74074132	1.00[AFR][1000 genomes]
rs74074136	1.00[AFR][1000 genomes]
rs74074142	1.00[AFR][1000 genomes]
rs74074143	1.00[AFR][1000 genomes]
rs74074145	1.00[AFR][1000 genomes]
rs74074160	1.00[AFR][1000 genomes]
rs74074164	1.00[AFR][1000 genomes]
rs74074165	1.00[AFR][1000 genomes]
rs74074173	1.00[AFR][1000 genomes]
rs74074174	1.00[AFR][1000 genomes]
rs74074178	1.00[AFR][1000 genomes]
rs74074179	0.86[AFR][1000 genomes]
rs74074181	0.94[AFR][1000 genomes]
rs74074194	1.00[AFR][1000 genomes]
rs74074195	0.88[AFR][1000 genomes]
rs74074199	1.00[AFR][1000 genomes]
rs74074200	1.00[AFR][1000 genomes]
rs74074201	0.83[AFR][1000 genomes]
rs74074212	1.00[AFR][1000 genomes]
rs74074771	0.93[AFR][1000 genomes]
rs74074775	0.93[AFR][1000 genomes]
rs74074776	0.93[AFR][1000 genomes]
rs74074777	0.93[AFR][1000 genomes]
rs74075903	1.00[AFR][1000 genomes]
rs74075911	1.00[AFR][1000 genomes]
rs74075914	1.00[AFR][1000 genomes]
rs74075919	1.00[AFR][1000 genomes]
rs74075924	1.00[AFR][1000 genomes]
rs74075926	1.00[AFR][1000 genomes]
rs74075929	1.00[AFR][1000 genomes]
rs74075977	1.00[AFR][1000 genomes]
rs74075979	0.97[AFR][1000 genomes]
rs74075981	1.00[AFR][1000 genomes]
rs74075988	1.00[AFR][1000 genomes]
rs74075989	1.00[AFR][1000 genomes]
rs74075992	1.00[AFR][1000 genomes]
rs74075994	1.00[AFR][1000 genomes]
rs74075995	1.00[AFR][1000 genomes]
rs74077229	0.94[AFR][1000 genomes]
rs74077249	1.00[AFR][1000 genomes]
rs74077256	1.00[AFR][1000 genomes]
rs74077265	0.94[AFR][1000 genomes]
rs74077323	0.97[AFR][1000 genomes]
rs74077325	0.97[AFR][1000 genomes]
rs74077329	0.90[AFR][1000 genomes]
rs74077334	0.97[AFR][1000 genomes]
rs74077337	0.93[AFR][1000 genomes]
rs74077343	0.97[AFR][1000 genomes]
rs74077351	1.00[AFR][1000 genomes]
rs74077354	0.94[AFR][1000 genomes]
rs74077358	1.00[AFR][1000 genomes]
rs74077359	1.00[AFR][1000 genomes]
rs74077360	1.00[AFR][1000 genomes]
rs74077603	1.00[AFR][1000 genomes]
rs74077604	1.00[AFR][1000 genomes]
rs74077606	1.00[AFR][1000 genomes]
rs74077607	1.00[AFR][1000 genomes]
rs74077616	0.91[AFR][1000 genomes]
rs74077617	1.00[AFR][1000 genomes]
rs74077621	1.00[AFR][1000 genomes]
rs74077622	1.00[AFR][1000 genomes]
rs74077625	1.00[AFR][1000 genomes]
rs74077626	0.88[AFR][1000 genomes]
rs74077628	1.00[AFR][1000 genomes]
rs74077630	1.00[AFR][1000 genomes]
rs74077632	0.83[AFR][1000 genomes]
rs9705599	0.80[AFR][1000 genomes]
rs9705699	1.00[AFR][1000 genomes]
rs9705808	1.00[AFR][1000 genomes]
rs9705830	1.00[AFR][1000 genomes]
rs9706028	1.00[AFR][1000 genomes]
rs9706487	0.80[AFR][1000 genomes]
rs9706488	0.80[AFR][1000 genomes]
rs9706494	1.00[AFR][1000 genomes]
rs9706561	0.93[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530516	chr2:56447922-56633505	Enhancers Flanking Active TSS Weak transcription Genic enhancers ZNF genes & repeats Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv874170	chr2:56496589-56590865	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv834093	chr2:56538097-56708677	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv1004449	chr2:56538460-56715861	ZNF genes & repeats Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv874171	chr2:56545845-56727178	Enhancers Weak transcription Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:56527600-56561000	Weak transcription	HSMM	muscle
2	chr2:56546200-56552800	Weak transcription	Left Ventricle	heart

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