Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:209458110..209461415-chr1:209461742..209463883,3	K562	blood:
2	chr1:209455685..209458026-chr1:209458937..209461319,2	K562	blood:

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs1395749	0.99[ASN][1000 genomes]
rs1395750	0.89[ASN][1000 genomes]
rs1507332	0.85[EUR][1000 genomes]
rs1507333	0.92[EUR][1000 genomes]
rs1553623	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17188142	0.82[CHB][hapmap];0.80[CHD][hapmap]
rs17260224	1.00[CEU][hapmap];1.00[MEX][hapmap];0.87[EUR][1000 genomes]
rs17260245	0.87[EUR][1000 genomes]
rs2055700	0.92[EUR][1000 genomes]
rs2245283	0.83[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs2245287	0.82[AFR][1000 genomes]
rs2489649	0.83[AFR][1000 genomes]
rs2489650	0.91[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs2660637	0.86[AFR][1000 genomes];0.99[ASN][1000 genomes]
rs2800930	1.00[CEU][hapmap];1.00[YRI][hapmap];0.92[EUR][1000 genomes]
rs2843169	0.85[AFR][1000 genomes];0.99[ASN][1000 genomes]
rs4504891	0.81[EUR][1000 genomes]
rs59658508	0.81[EUR][1000 genomes]
rs6661882	0.87[EUR][1000 genomes]
rs6681844	0.81[EUR][1000 genomes]
rs6687960	0.87[EUR][1000 genomes]
rs6700119	0.85[ASN][1000 genomes]
rs72756413	0.95[ASN][1000 genomes]
rs72756439	0.84[ASN][1000 genomes]
rs73085919	0.81[EUR][1000 genomes]
rs73085926	0.81[EUR][1000 genomes]
rs73085932	0.81[EUR][1000 genomes]
rs73085950	0.81[EUR][1000 genomes]
rs906352	0.89[EUR][1000 genomes]
rs949488	0.92[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832481	chr1:209371276-209540333	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	nsv832492	chr1:209383771-209589312	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:209459400-209461200	Enhancers	Fetal Lung	lung
2	chr1:209459800-209460600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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