Variant report
| Variant | rs9805090 |
|---|---|
| Chromosome Location | chr12:50141780-50141781 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:50136600-50146400 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 2 | chr12:50136800-50144200 | Enhancers | Primary T helper naive cells from peripheral blood | blood |
| 3 | chr12:50136800-50146600 | Enhancers | Primary T killer naive cells fromperipheralblood | blood |
| 4 | chr12:50137000-50142000 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 5 | chr12:50137000-50142200 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 6 | chr12:50137000-50143800 | Weak transcription | Colonic Mucosa | Colon |
| 7 | chr12:50137000-50146200 | Weak transcription | HSMMtube | muscle |
| 8 | chr12:50137000-50147000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 9 | chr12:50137200-50146200 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 10 | chr12:50137200-50152000 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 11 | chr12:50137400-50142000 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 12 | chr12:50137400-50143200 | Strong transcription | Fetal Thymus | thymus |
| 13 | chr12:50137400-50146400 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 14 | chr12:50137400-50146400 | Enhancers | Primary T helper memory cells from peripheral blood 2 | blood |
| 15 | chr12:50137400-50146600 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 16 | chr12:50137400-50150800 | Weak transcription | Fetal Brain Male | brain |
| 17 | chr12:50137600-50146200 | Enhancers | Primary T helper naive cells fromperipheralblood | blood |
| 18 | chr12:50137800-50142000 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 19 | chr12:50137800-50142200 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 20 | chr12:50137800-50142200 | Weak transcription | HSMM | muscle |
| 21 | chr12:50137800-50143800 | Weak transcription | Fetal Stomach | stomach |
| 22 | chr12:50137800-50144200 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 23 | chr12:50137800-50146200 | Weak transcription | Fetal Kidney | kidney |
| 24 | chr12:50138000-50143800 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 25 | chr12:50138200-50146400 | Weak transcription | Fetal Brain Female | brain |
| 26 | chr12:50138400-50143000 | Weak transcription | Stomach Mucosa | stomach |
| 27 | chr12:50138400-50144000 | Weak transcription | Fetal Lung | lung |
| 28 | chr12:50138600-50142000 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 29 | chr12:50138600-50142200 | Weak transcription | Brain Anterior Caudate | brain |
| 30 | chr12:50138600-50142600 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 31 | chr12:50138600-50142800 | Weak transcription | NH-A | brain |
| 32 | chr12:50138600-50143400 | Weak transcription | Fetal Muscle Trunk | muscle |
| 33 | chr12:50138600-50143800 | Weak transcription | Primary hematopoietic stem cells | blood |
| 34 | chr12:50138600-50143800 | Weak transcription | Small Intestine | intestine |
| 35 | chr12:50138600-50144000 | Weak transcription | Esophagus | oesophagus |
| 36 | chr12:50138600-50144200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 37 | chr12:50138600-50146400 | Weak transcription | Brain Germinal Matrix | brain |
| 38 | chr12:50138800-50142000 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 39 | chr12:50138800-50142000 | Weak transcription | Osteobl | bone |
| 40 | chr12:50138800-50143800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 41 | chr12:50138800-50143800 | Weak transcription | NHLF | lung |
| 42 | chr12:50138800-50144000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 43 | chr12:50139000-50142000 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 44 | chr12:50139000-50142000 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 45 | chr12:50139000-50142000 | Weak transcription | NHDF-Ad | bronchial |
| 46 | chr12:50139000-50142200 | Enhancers | Fetal Heart | heart |
| 47 | chr12:50139000-50142800 | Enhancers | Primary T helper 17 cells PMA-I stimulated | -- |
| 48 | chr12:50139000-50143800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 49 | chr12:50139000-50143800 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 50 | chr12:50139000-50143800 | Weak transcription | Aorta | Aorta |
