The 2.0 version of rSNPBase

Variant report

Variant rs9818025
Chromosome Location chr3:111731902-111731903
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:111718400-111732200 Weak transcription Lung lung
2 chr3:111720200-111752800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr3:111720800-111732200 Weak transcription H1 Cell Line embryonic stem cell
4 chr3:111721800-111732200 Weak transcription HUES6 Cell Line embryonic stem cell
5 chr3:111722000-111732200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr3:111722600-111732600 Weak transcription HUES64 Cell Line embryonic stem cell
7 chr3:111723000-111732200 Weak transcription iPS-20b Cell Line embryonic stem cell
8 chr3:111723000-111732200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr3:111724000-111732000 Weak transcription Fetal Intestine Small intestine
10 chr3:111724400-111732000 Weak transcription Fetal Intestine Large intestine
11 chr3:111724400-111734200 Weak transcription NH-A brain
12 chr3:111724600-111734400 Weak transcription iPS-18 Cell Line embryonic stem cell
13 chr3:111726600-111732200 Weak transcription Fetal Brain Male brain
14 chr3:111727400-111732000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr3:111727600-111733200 Strong transcription Brain Germinal Matrix brain
16 chr3:111728000-111732000 Weak transcription Ovary ovary
17 chr3:111728000-111732200 Weak transcription HUES48 Cell Line embryonic stem cell
18 chr3:111728400-111732400 Weak transcription H9 Cell Line embryonic stem cell
19 chr3:111728400-111734000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr3:111729000-111732400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr3:111729200-111732200 Enhancers Adipose Nuclei Adipose
22 chr3:111729400-111732800 Enhancers Fetal Adrenal Gland Adrenal Gland
23 chr3:111729600-111733800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr3:111730200-111732200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr3:111730400-111732400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr3:111730400-111732400 Enhancers Fetal Heart heart
27 chr3:111730400-111732600 Enhancers Stomach Mucosa stomach
28 chr3:111730400-111735600 Weak transcription Pancreatic Islets Pancreatic Islet
29 chr3:111730600-111732200 Enhancers Skeletal Muscle Female skeletal muscle
30 chr3:111730800-111732000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
31 chr3:111730800-111732000 Weak transcription Fetal Muscle Trunk muscle
32 chr3:111730800-111732000 Weak transcription Gastric stomach
33 chr3:111730800-111732200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr3:111730800-111732400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr3:111730800-111732600 Enhancers HSMM muscle
36 chr3:111730800-111732800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr3:111730800-111734400 Weak transcription HMEC breast
38 chr3:111731000-111732000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr3:111731000-111732000 Weak transcription Brain Inferior Temporal Lobe brain
40 chr3:111731000-111732000 Weak transcription Fetal Muscle Leg muscle
41 chr3:111731000-111732000 Weak transcription Placenta Placenta
42 chr3:111731000-111732000 Weak transcription Left Ventricle heart
43 chr3:111731000-111732000 Weak transcription Right Atrium heart
44 chr3:111731000-111732000 Weak transcription Right Ventricle heart
45 chr3:111731000-111732200 Weak transcription Brain Hippocampus Middle brain
46 chr3:111731000-111732200 Weak transcription Fetal Brain Female brain
47 chr3:111731000-111732200 Weak transcription NHEK skin
48 chr3:111731000-111736000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr3:111731000-111739200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr3:111731400-111732200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015