The 2.0 version of rSNPBase

Variant report

Variant rs9868226
Chromosome Location chr3:111727673-111727674
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:111718400-111730000 Weak transcription Gastric stomach
2 chr3:111718400-111732200 Weak transcription Lung lung
3 chr3:111719000-111729800 Weak transcription Right Ventricle heart
4 chr3:111720000-111727800 Weak transcription H9 Cell Line embryonic stem cell
5 chr3:111720200-111752800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr3:111720600-111730600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr3:111720800-111729800 Weak transcription Brain Anterior Caudate brain
8 chr3:111720800-111732200 Weak transcription H1 Cell Line embryonic stem cell
9 chr3:111721800-111732200 Weak transcription HUES6 Cell Line embryonic stem cell
10 chr3:111722000-111732200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr3:111722600-111732600 Weak transcription HUES64 Cell Line embryonic stem cell
12 chr3:111722800-111729800 Weak transcription Brain Inferior Temporal Lobe brain
13 chr3:111723000-111732200 Weak transcription iPS-20b Cell Line embryonic stem cell
14 chr3:111723000-111732200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr3:111723200-111727800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr3:111723400-111730000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr3:111724000-111729200 Weak transcription Pancreatic Islets Pancreatic Islet
18 chr3:111724000-111732000 Weak transcription Fetal Intestine Small intestine
19 chr3:111724200-111728400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr3:111724400-111729400 Weak transcription Brain Angular Gyrus brain
21 chr3:111724400-111729800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr3:111724400-111732000 Weak transcription Fetal Intestine Large intestine
23 chr3:111724400-111734200 Weak transcription NH-A brain
24 chr3:111724600-111734400 Weak transcription iPS-18 Cell Line embryonic stem cell
25 chr3:111725000-111728000 Genic enhancers Ganglion Eminence derived primary cultured neurospheres brain
26 chr3:111725000-111728600 Enhancers Fetal Lung lung
27 chr3:111726400-111728200 Enhancers Aorta Aorta
28 chr3:111726400-111728800 Enhancers Right Atrium heart
29 chr3:111726600-111727800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr3:111726600-111727800 Weak transcription Fetal Brain Female brain
31 chr3:111726600-111728400 Enhancers Liver Liver
32 chr3:111726600-111729400 Weak transcription Fetal Muscle Leg muscle
33 chr3:111726600-111729400 Weak transcription Fetal Stomach stomach
34 chr3:111726600-111729800 Weak transcription Left Ventricle heart
35 chr3:111726600-111730000 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr3:111726600-111730200 Weak transcription HMEC breast
37 chr3:111726600-111730400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr3:111726600-111731000 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr3:111726600-111732200 Weak transcription Fetal Brain Male brain
40 chr3:111727000-111728000 Weak transcription Stomach Mucosa stomach
41 chr3:111727000-111729000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr3:111727000-111729200 Weak transcription HSMMtube muscle
43 chr3:111727000-111729400 Weak transcription Brain Hippocampus Middle brain
44 chr3:111727000-111730400 Weak transcription NHEK skin
45 chr3:111727200-111727800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr3:111727400-111727800 Enhancers HepG2 liver
47 chr3:111727400-111729400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
48 chr3:111727400-111729400 Weak transcription Osteobl bone
49 chr3:111727400-111730400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr3:111727400-111730400 Weak transcription Fetal Heart heart

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015