Variant report

Variant	rs982237
Chromosome Location	chr4:172368067-172368068
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs72985157	0.85[EUR][1000 genomes]
rs7667453	0.85[EUR][1000 genomes]
rs7677090	0.84[EUR][1000 genomes]
rs982238	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:28 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1018793	chr4:171808272-172395180	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	16 gene(s)	inside rSNPs	diseases
2	nsv461836	chr4:171963233-172494233	ZNF genes & repeats Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	13 gene(s)	inside rSNPs	diseases
3	nsv596169	chr4:171963233-172494233	Enhancers ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	13 gene(s)	inside rSNPs	diseases
4	nsv1016836	chr4:171982072-172496279	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases
5	nsv537355	chr4:171982072-172496279	Weak transcription Active TSS Enhancers ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases
6	nsv881556	chr4:172205108-172491284	Weak transcription Enhancers Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
7	nsv881194	chr4:172315768-172376702	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
8	nsv881483	chr4:172315768-172388728	Enhancers Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
9	nsv880978	chr4:172315768-172405095	Weak transcription Enhancers Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
10	nsv880557	chr4:172315768-172458600	Enhancers Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
11	nsv881360	chr4:172315768-172491284	Enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a
12	nsv880315	chr4:172328758-172388728	Enhancers Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
13	nsv881499	chr4:172331641-172388728	Enhancers Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
14	nsv1034842	chr4:172351318-172377764	Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
15	nsv4604	chr4:172360664-172425786	Enhancers Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
16	nsv1017731	chr4:172361430-172377921	Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
17	nsv1027195	chr4:172364504-172377921	Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
18	nsv1025137	chr4:172367095-172377921	Enhancers	n/a	n/a	inside rSNPs	n/a
19	nsv1026407	chr4:172367129-172380359	Enhancers	n/a	n/a	inside rSNPs	n/a
20	nsv1021232	chr4:172367269-172377712	Enhancers	n/a	n/a	inside rSNPs	n/a
21	nsv1031381	chr4:172367269-172377921	Enhancers	n/a	n/a	inside rSNPs	n/a
22	nsv1017069	chr4:172367375-172377921	Enhancers	n/a	n/a	inside rSNPs	n/a
23	nsv1019619	chr4:172367540-172377921	Enhancers	n/a	n/a	inside rSNPs	n/a
24	esv1815655	chr4:172367540-172432296	Enhancers Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
25	esv1822088	chr4:172367540-172432296	Active TSS Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
26	esv1825189	chr4:172367540-172432296	Enhancers Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
27	esv1831472	chr4:172367540-172432296	Enhancers Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
28	esv1843827	chr4:172367540-172432296	Active TSS Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:172367400-172368800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr4:172367600-172368600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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