The 2.0 version of rSNPBase

Variant report

Variant rs9827157
Chromosome Location chr3:179447852-179447853
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:179385000-179448400 Weak transcription Fetal Brain Male brain
2 chr3:179391000-179452200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr3:179399000-179459800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr3:179406200-179503000 Weak transcription Primary T regulatory cells fromperipheralblood blood
5 chr3:179406600-179449400 Weak transcription Spleen Spleen
6 chr3:179416200-179448400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr3:179420200-179478800 Weak transcription Rectal Smooth Muscle rectum
8 chr3:179422800-179460600 Weak transcription Duodenum Mucosa Duodenum
9 chr3:179423400-179448200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
10 chr3:179423400-179448400 Weak transcription Gastric stomach
11 chr3:179424000-179474800 Weak transcription Fetal Kidney kidney
12 chr3:179424400-179487600 Weak transcription Primary T helper naive cells from peripheral blood blood
13 chr3:179425200-179448400 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr3:179427000-179457600 Weak transcription Thymus Thymus
15 chr3:179427400-179449200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr3:179428800-179452200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr3:179428800-179456800 Weak transcription HUVEC blood vessel
18 chr3:179428800-179460000 Weak transcription Brain Substantia Nigra brain
19 chr3:179429000-179466200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr3:179434400-179449200 Weak transcription Fetal Heart heart
21 chr3:179434400-179450600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr3:179434600-179452200 Weak transcription A549 lung
23 chr3:179435200-179449200 Weak transcription Muscle Satellite Cultured Cells --
24 chr3:179435400-179450600 Weak transcription HSMMtube muscle
25 chr3:179435600-179460000 Weak transcription NHDF-Ad bronchial
26 chr3:179436000-179459800 Weak transcription Small Intestine intestine
27 chr3:179436200-179448200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr3:179436400-179448400 Weak transcription NHLF lung
29 chr3:179437400-179490200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
30 chr3:179437400-179501800 Weak transcription Pancreatic Islets Pancreatic Islet
31 chr3:179438000-179448000 Weak transcription iPS-18 Cell Line embryonic stem cell
32 chr3:179438200-179452200 Weak transcription ES-WA7 Cell Line embryonic stem cell
33 chr3:179438400-179489200 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr3:179439600-179448200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr3:179439600-179448200 Weak transcription Liver Liver
36 chr3:179439600-179448400 Weak transcription HSMM muscle
37 chr3:179439600-179452200 Weak transcription NHEK skin
38 chr3:179439800-179452400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr3:179440000-179448400 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr3:179440200-179448200 Weak transcription Osteobl bone
41 chr3:179440200-179448600 Weak transcription Fetal Brain Female brain
42 chr3:179440200-179448600 Weak transcription NH-A brain
43 chr3:179440800-179449400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr3:179441000-179448400 Weak transcription Brain Inferior Temporal Lobe brain
45 chr3:179441000-179448800 Weak transcription Fetal Intestine Small intestine
46 chr3:179441000-179449000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
47 chr3:179441000-179449000 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr3:179441000-179484200 Weak transcription Colon Smooth Muscle Colon
49 chr3:179441200-179448000 Weak transcription Primary T helper cells fromperipheralblood blood
50 chr3:179441200-179460600 Weak transcription Brain Cingulate Gyrus brain

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Last update: Aug 31, 2015