The 2.0 version of rSNPBase

Variant report

Variant rs9830987
Chromosome Location chr3:67483279-67483280
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:67435600-67509800 Weak transcription Ovary ovary
2 chr3:67435600-67534200 Weak transcription Aorta Aorta
3 chr3:67449400-67486600 Weak transcription Fetal Stomach stomach
4 chr3:67451200-67487800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr3:67463000-67487400 Weak transcription Pancreas Pancrea
6 chr3:67463200-67484200 Weak transcription Right Ventricle heart
7 chr3:67465400-67489600 Weak transcription Stomach Smooth Muscle stomach
8 chr3:67466600-67484400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr3:67466600-67486200 Weak transcription Left Ventricle heart
10 chr3:67466600-67508400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr3:67471200-67487600 Weak transcription A549 lung
12 chr3:67471200-67503800 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr3:67471400-67497600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr3:67471600-67483400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
15 chr3:67471600-67483800 Weak transcription Fetal Lung lung
16 chr3:67471600-67486600 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr3:67471600-67487600 Weak transcription Fetal Intestine Large intestine
18 chr3:67471600-67489200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr3:67471600-67518800 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr3:67471800-67487800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr3:67472000-67506200 Weak transcription Primary T regulatory cells fromperipheralblood blood
22 chr3:67472000-67509800 Weak transcription HSMM muscle
23 chr3:67472600-67483800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr3:67473400-67492200 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr3:67473400-67521000 Weak transcription Primary T helper cells PMA-I stimulated --
26 chr3:67473600-67487400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr3:67473600-67487400 Weak transcription Liver Liver
28 chr3:67473600-67542000 Weak transcription Duodenum Mucosa Duodenum
29 chr3:67478200-67512200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr3:67478600-67492000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr3:67478800-67483800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr3:67479000-67485800 Weak transcription Fetal Intestine Small intestine
33 chr3:67481400-67493400 Weak transcription Muscle Satellite Cultured Cells --
34 chr3:67482400-67484000 Strong transcription Primary T helper cells fromperipheralblood blood
35 chr3:67482400-67486200 Weak transcription Adipose Nuclei Adipose
36 chr3:67482600-67483600 Weak transcription Primary B cells from peripheral blood blood
37 chr3:67482600-67484200 Weak transcription Cortex derived primary cultured neurospheres brain
38 chr3:67482600-67527200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
39 chr3:67482600-67528600 Weak transcription GM12878-XiMat blood
40 chr3:67482800-67483800 Weak transcription Primary B cells from cord blood blood
41 chr3:67482800-67503800 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr3:67482800-67520800 Weak transcription Primary T cells fromperipheralblood blood
43 chr3:67482800-67533400 Weak transcription Sigmoid Colon Sigmoid Colon
44 chr3:67483000-67485600 Strong transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015