Variant report
| Variant | rs9839035 |
|---|---|
| Chromosome Location | chr3:52909877-52909878 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:52886600-52911000 | Weak transcription | Primary B cells from cord blood | blood |
| 2 | chr3:52886600-52920000 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 3 | chr3:52886600-52930200 | Weak transcription | Colonic Mucosa | Colon |
| 4 | chr3:52887000-52919400 | Weak transcription | Fetal Brain Female | brain |
| 5 | chr3:52887000-52926400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 6 | chr3:52887800-52923200 | Weak transcription | Brain Germinal Matrix | brain |
| 7 | chr3:52891600-52919600 | Weak transcription | Left Ventricle | heart |
| 8 | chr3:52892000-52926400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 9 | chr3:52894600-52911200 | Weak transcription | Stomach Smooth Muscle | stomach |
| 10 | chr3:52895400-52919400 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 11 | chr3:52895800-52923800 | Weak transcription | Brain Cingulate Gyrus | brain |
| 12 | chr3:52895800-52925200 | Weak transcription | Esophagus | oesophagus |
| 13 | chr3:52900000-52912800 | Weak transcription | Primary B cells from peripheral blood | blood |
| 14 | chr3:52900600-52912200 | Weak transcription | Fetal Muscle Leg | muscle |
| 15 | chr3:52900800-52912400 | Weak transcription | Fetal Muscle Trunk | muscle |
| 16 | chr3:52900800-52912800 | Weak transcription | Fetal Intestine Small | intestine |
| 17 | chr3:52900800-52913000 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 18 | chr3:52901400-52910200 | Weak transcription | Spleen | Spleen |
| 19 | chr3:52901800-52912800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 20 | chr3:52902200-52925200 | Weak transcription | Placenta | Placenta |
| 21 | chr3:52904000-52918400 | Weak transcription | Fetal Intestine Large | intestine |
| 22 | chr3:52904200-52911200 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 23 | chr3:52904400-52912800 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 24 | chr3:52904600-52919400 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 25 | chr3:52904800-52912600 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 26 | chr3:52904800-52912800 | Weak transcription | Primary hematopoietic stem cells | blood |
| 27 | chr3:52905000-52919800 | Weak transcription | Right Ventricle | heart |
| 28 | chr3:52905600-52910000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 29 | chr3:52905600-52911200 | Weak transcription | Fetal Stomach | stomach |
| 30 | chr3:52906000-52924400 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 31 | chr3:52907800-52910400 | Enhancers | Thymus | Thymus |
| 32 | chr3:52908000-52911000 | Weak transcription | Pancreas | Pancrea |
| 33 | chr3:52908000-52912200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 34 | chr3:52908000-52912800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 35 | chr3:52908000-52915800 | Weak transcription | Colon Smooth Muscle | Colon |
| 36 | chr3:52908000-52916200 | Weak transcription | Aorta | Aorta |
| 37 | chr3:52908000-52924000 | Weak transcription | Brain Hippocampus Middle | brain |
| 38 | chr3:52908000-52924000 | Weak transcription | Brain Substantia Nigra | brain |
| 39 | chr3:52908200-52910000 | Enhancers | Monocytes-CD14+_RO01746 | blood |
| 40 | chr3:52908200-52910200 | Enhancers | Primary monocytes fromperipheralblood | blood |
| 41 | chr3:52908200-52912800 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 42 | chr3:52908200-52913200 | Weak transcription | Adipose Nuclei | Adipose |
| 43 | chr3:52908200-52919000 | Weak transcription | NHEK | skin |
| 44 | chr3:52908200-52919600 | Weak transcription | HSMM | muscle |
| 45 | chr3:52908200-52925400 | Weak transcription | Brain Anterior Caudate | brain |
| 46 | chr3:52908200-52925400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 47 | chr3:52908400-52910000 | Enhancers | GM12878-XiMat | blood |
| 48 | chr3:52908400-52924400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 49 | chr3:52908400-52924600 | Weak transcription | NHLF | lung |
| 50 | chr3:52908400-52930600 | Weak transcription | A549 | lung |
