Variant report

Variant	rs9851652
Chromosome Location	chr3:55815615-55815616
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs13314858	1.00[AFR][1000 genomes]
rs28450140	1.00[AFR][1000 genomes]
rs28565350	1.00[AFR][1000 genomes]
rs6785716	1.00[AFR][1000 genomes]
rs72877152	1.00[AFR][1000 genomes]
rs9811607	1.00[AFR][1000 genomes]
rs9815229	1.00[AFR][1000 genomes]
rs9824953	1.00[AFR][1000 genomes]
rs9831205	1.00[AFR][1000 genomes]
rs9848245	1.00[AFR][1000 genomes]
rs9850977	1.00[AFR][1000 genomes]
rs9868187	1.00[AFR][1000 genomes]
rs9875858	1.00[AFR][1000 genomes]
rs9875894	1.00[AFR][1000 genomes]
rs9875929	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv876814	chr3:55802749-55860526	Weak transcription Enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:55810600-55816200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr3:55814800-55817400	Enhancers	Spleen	Spleen
3	chr3:55815000-55816200	Weak transcription	Pancreas	Pancrea
4	chr3:55815200-55816600	Enhancers	Gastric	stomach
5	chr3:55815600-55816600	Weak transcription	Fetal Heart	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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