Variant report

Variant	rs9857245
Chromosome Location	chr3:17012904-17012905
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs13315007	1.00[AFR][1000 genomes]
rs28396145	1.00[AFR][1000 genomes]
rs9844511	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv980048	chr3:16995372-17016178	Weak transcription Enhancers ZNF genes & repeats Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:16987400-17015600	Weak transcription	Aorta	Aorta
2	chr3:17005400-17015000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
3	chr3:17009200-17026600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
4	chr3:17009800-17015000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
5	chr3:17010400-17015600	Weak transcription	Right Ventricle	heart
6	chr3:17011000-17015000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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