Variant report

Variant	rs9869514
Chromosome Location	chr3:159452813-159452814
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs11705997	0.89[CEU][hapmap];0.84[YRI][hapmap];0.84[AMR][1000 genomes]
rs11719460	0.89[CEU][hapmap]
rs13059769	0.89[CEU][hapmap]
rs13064601	1.00[CEU][hapmap]
rs1497763	0.90[CEU][hapmap];0.81[AMR][1000 genomes]
rs16830643	0.90[CEU][hapmap]
rs4680511	1.00[CEU][hapmap];0.91[EUR][1000 genomes]
rs6441268	0.89[CEU][hapmap]
rs6790484	0.89[CEU][hapmap]
rs7628548	0.90[CEU][hapmap]
rs7628992	0.90[CEU][hapmap]
rs9812406	0.89[CEU][hapmap]
rs9838950	0.90[CEU][hapmap]
rs9845025	0.89[CEU][hapmap]
rs9865997	0.89[CEU][hapmap]
rs9869674	0.90[CEU][hapmap]
rs9872731	0.89[CEU][hapmap]

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:159450600-159456600	Weak transcription	Fetal Intestine Large	intestine
2	chr3:159450800-159457800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr3:159450800-159457800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr3:159450800-159480600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr3:159451400-159457800	Weak transcription	H1 Cell Line	embryonic stem cell
6	chr3:159451600-159461200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
7	chr3:159451800-159453000	Weak transcription	Rectal Smooth Muscle	rectum
8	chr3:159451800-159453000	Enhancers	Osteobl	bone
9	chr3:159451800-159453400	Weak transcription	Fetal Heart	heart
10	chr3:159451800-159453800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr3:159451800-159455400	Weak transcription	Colon Smooth Muscle	Colon
12	chr3:159451800-159456200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
13	chr3:159451800-159456400	Weak transcription	HUES64 Cell Line	embryonic stem cell
14	chr3:159451800-159456600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
15	chr3:159451800-159456600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
16	chr3:159451800-159457000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
17	chr3:159451800-159457000	Weak transcription	HUES6 Cell Line	embryonic stem cell
18	chr3:159451800-159457000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
19	chr3:159451800-159457600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
20	chr3:159451800-159470200	Weak transcription	NHEK	skin
21	chr3:159451800-159473200	Weak transcription	Aorta	Aorta
22	chr3:159451800-159478800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
23	chr3:159452000-159466200	Weak transcription	HMEC	breast
24	chr3:159452200-159456400	Enhancers	Breast Myoepithelial Primary Cells	Breast
25	chr3:159452400-159455000	Weak transcription	A549	lung
26	chr3:159452400-159456600	Weak transcription	HUES48 Cell Line	embryonic stem cell
27	chr3:159452400-159457400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
28	chr3:159452400-159468200	Weak transcription	HSMM	muscle
29	chr3:159452600-159460400	Weak transcription	HSMMtube	muscle
30	chr3:159452800-159453600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
31	chr3:159452800-159457800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung

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