Variant report

Variant rs9893057
Chromosome Location chr17:16283125-16283126
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:16257200-16283800 Weak transcription Right Atrium heart
2 chr17:16275600-16283600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
3 chr17:16278200-16283600 Weak transcription Skeletal Muscle Male skeletal muscle
4 chr17:16278400-16283600 Weak transcription Adipose Nuclei Adipose
5 chr17:16280800-16283800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr17:16280800-16283800 Enhancers Stomach Mucosa stomach
7 chr17:16281000-16283200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr17:16281200-16283400 Enhancers Cortex derived primary cultured neurospheres brain
9 chr17:16281400-16283600 Enhancers Breast Myoepithelial Primary Cells Breast
10 chr17:16281600-16283800 Weak transcription Fetal Lung lung
11 chr17:16281800-16283200 Enhancers Rectal Mucosa Donor 31 rectum
12 chr17:16281800-16283600 Enhancers Brain Cingulate Gyrus brain
13 chr17:16282000-16283200 Flanking Active TSS HepG2 liver
14 chr17:16282000-16283400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr17:16282000-16283800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr17:16282000-16283800 Weak transcription Muscle Satellite Cultured Cells --
17 chr17:16282200-16283600 Weak transcription iPS-15b Cell Line embryonic stem cell
18 chr17:16282200-16283600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr17:16282200-16283600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr17:16282200-16283600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr17:16282400-16283400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
22 chr17:16282400-16283600 Weak transcription Brain Anterior Caudate brain
23 chr17:16282400-16283600 Weak transcription Brain Inferior Temporal Lobe brain
24 chr17:16282400-16283600 Weak transcription Osteobl bone
25 chr17:16282400-16283800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr17:16282400-16283800 Weak transcription Brain Substantia Nigra brain
27 chr17:16282400-16283800 Weak transcription NHDF-Ad bronchial
28 chr17:16282400-16283800 Weak transcription NHLF lung
29 chr17:16282600-16283200 Enhancers Gastric stomach
30 chr17:16282600-16283200 Enhancers NHEK skin
31 chr17:16282600-16283400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr17:16282600-16283400 Weak transcription Fetal Intestine Large intestine
33 chr17:16282600-16283600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr17:16282600-16283600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr17:16282600-16283600 Weak transcription Brain Angular Gyrus brain
36 chr17:16282600-16283800 Weak transcription Liver Liver
37 chr17:16282600-16283800 Weak transcription Lung lung
38 chr17:16282600-16283800 Weak transcription Pancreas Pancrea
39 chr17:16282600-16283800 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr17:16282600-16284000 Weak transcription Sigmoid Colon Sigmoid Colon
41 chr17:16282800-16283600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr17:16282800-16283600 Weak transcription Brain Hippocampus Middle brain
43 chr17:16282800-16283600 Weak transcription A549 lung
44 chr17:16282800-16283600 Weak transcription Hela-S3 cervix
45 chr17:16282800-16283800 Weak transcription HMEC breast
46 chr17:16283000-16283600 Enhancers Placenta Placenta
47 chr17:16283000-16283600 Enhancers GM12878-XiMat blood
48 chr17:16283000-16283800 Enhancers Spleen Spleen
49 chr17:16283000-16283800 Weak transcription K562 blood
50 chr17:16283000-16284000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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