Variant report

Variant rs9898044
Chromosome Location chr17:17727983-17727984
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:17718200-17728600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
2 chr17:17723200-17730000 Enhancers Stomach Mucosa stomach
3 chr17:17723800-17728800 Enhancers Gastric stomach
4 chr17:17725000-17729600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
5 chr17:17725600-17728600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
6 chr17:17726000-17728800 Enhancers Placenta Amnion Placenta Amnion
7 chr17:17726400-17728600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr17:17726600-17728200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
9 chr17:17726800-17729400 Enhancers Small Intestine intestine
10 chr17:17726800-17730000 Enhancers Lung lung
11 chr17:17726800-17730200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr17:17727000-17729400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr17:17727000-17732200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr17:17727200-17728000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr17:17727200-17728000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr17:17727200-17728000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
17 chr17:17727200-17728000 Flanking Active TSS Brain Hippocampus Middle brain
18 chr17:17727200-17728000 Flanking Active TSS Brain Substantia Nigra brain
19 chr17:17727200-17728000 Flanking Active TSS Colonic Mucosa Colon
20 chr17:17727200-17728000 Flanking Active TSS Duodenum Mucosa Duodenum
21 chr17:17727200-17728200 Flanking Active TSS Primary hematopoietic stem cells blood
22 chr17:17727200-17728200 Flanking Active TSS Hela-S3 cervix
23 chr17:17727200-17728400 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
24 chr17:17727200-17728600 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr17:17727200-17728600 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
26 chr17:17727200-17728600 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
27 chr17:17727200-17728600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr17:17727200-17728600 Flanking Active TSS Adipose Nuclei Adipose
29 chr17:17727200-17728600 Flanking Active TSS Skeletal Muscle Male skeletal muscle
30 chr17:17727200-17728600 Flanking Active TSS Skeletal Muscle Female skeletal muscle
31 chr17:17727200-17728600 Flanking Active TSS Stomach Smooth Muscle stomach
32 chr17:17727200-17728600 Flanking Active TSS A549 lung
33 chr17:17727200-17728600 Flanking Active TSS HepG2 liver
34 chr17:17727200-17730400 Enhancers Spleen Spleen
35 chr17:17727400-17728000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
36 chr17:17727400-17728000 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr17:17727400-17728200 Flanking Active TSS Brain Cingulate Gyrus brain
38 chr17:17727400-17728400 Enhancers Fetal Brain Male brain
39 chr17:17727400-17728400 Enhancers Ovary ovary
40 chr17:17727400-17728600 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
41 chr17:17727400-17728600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr17:17727400-17728600 Enhancers Aorta Aorta
43 chr17:17727400-17728600 Flanking Active TSS Brain Anterior Caudate brain
44 chr17:17727400-17728600 Flanking Active TSS Colon Smooth Muscle Colon
45 chr17:17727400-17728600 Flanking Active TSS Rectal Smooth Muscle rectum
46 chr17:17727400-17728600 Flanking Active TSS K562 blood
47 chr17:17727400-17729600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr17:17727400-17729800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
49 chr17:17727600-17728000 Enhancers Fetal Kidney kidney
50 chr17:17727600-17728000 Enhancers Sigmoid Colon Sigmoid Colon

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