Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr17:33883508..33885797-chr17:33888017..33890924,2	MCF-7	breast:
2	chr17:33886372..33890944-chr17:33891247..33895229,11	K562	blood:

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10068	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10512472	0.83[ASN][1000 genomes]
rs11080357	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11653310	0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11656138	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12452797	0.83[ASN][1000 genomes]
rs1671656	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs17637907	0.99[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1968578	0.83[ASN][1000 genomes]
rs225243	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs225247	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs225251	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs225254	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs225259	0.83[EUR][1000 genomes]
rs225262	0.81[EUR][1000 genomes]
rs225277	0.81[EUR][1000 genomes]
rs225295	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs225304	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2840044	0.99[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7212704	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7221322	0.82[EUR][1000 genomes]
rs7503168	0.81[ASN][1000 genomes]
rs8069037	0.84[EUR][1000 genomes]
rs9891800	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9894057	0.83[ASN][1000 genomes]
rs9900378	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9913003	0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv534371	chr17:33456878-34094068	Strong transcription Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	137 gene(s)	inside rSNPs	diseases
2	nsv908079	chr17:33849869-34034851	Active TSS Strong transcription Flanking Active TSS Enhancers Weak transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases
3	nsv1060890	chr17:33884124-34011034	Weak transcription Flanking Active TSS Active TSS Enhancers Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases
4	nsv543318	chr17:33884124-34011034	Genic enhancers Strong transcription Flanking Active TSS Weak transcription Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:33888400-33890200	Enhancers	K562	blood
2	chr17:33888600-33894200	Weak transcription	Primary hematopoietic stem cells	blood
3	chr17:33889600-33894000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr17:33889800-33894000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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