The 2.0 version of rSNPBase

Variant report

Variant rs9923385
Chromosome Location chr16:48628080-48628081
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:48605000-48630200 Weak transcription Spleen Spleen
2 chr16:48612400-48630200 Weak transcription Gastric stomach
3 chr16:48618000-48631600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr16:48618200-48630400 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr16:48618200-48640400 Weak transcription Rectal Smooth Muscle rectum
6 chr16:48619200-48631800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr16:48621200-48631400 Weak transcription Brain Angular Gyrus brain
8 chr16:48622400-48632800 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr16:48622600-48632600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr16:48623400-48629000 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
11 chr16:48623600-48629600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
12 chr16:48623600-48629800 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr16:48624000-48628400 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr16:48624200-48628600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr16:48624400-48630600 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
16 chr16:48624400-48632200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
17 chr16:48624600-48628800 ZNF genes & repeats GM12878-XiMat blood
18 chr16:48624600-48630200 Weak transcription Pancreas Pancrea
19 chr16:48624800-48629600 Weak transcription Ovary ovary
20 chr16:48624800-48630200 Weak transcription Lung lung
21 chr16:48624800-48630200 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr16:48625000-48630200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr16:48625200-48631400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr16:48625600-48628400 ZNF genes & repeats HepG2 liver
25 chr16:48625600-48630000 Weak transcription Primary T helper naive cells fromperipheralblood blood
26 chr16:48625800-48628400 ZNF genes & repeats A549 lung
27 chr16:48626200-48629800 Weak transcription Primary T killer naive cells fromperipheralblood blood
28 chr16:48626400-48630000 Weak transcription Skeletal Muscle Male skeletal muscle
29 chr16:48626400-48630200 Weak transcription Left Ventricle heart
30 chr16:48626400-48631600 Weak transcription Hela-S3 cervix
31 chr16:48626400-48640400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr16:48626600-48630000 Weak transcription Primary T helper naive cells from peripheral blood blood
33 chr16:48627000-48628200 Weak transcription Primary T cells fromperipheralblood blood
34 chr16:48627000-48629600 Weak transcription Primary neutrophils fromperipheralblood blood
35 chr16:48627000-48630000 Weak transcription Colon Smooth Muscle Colon
36 chr16:48627200-48628200 Weak transcription Esophagus oesophagus
37 chr16:48627200-48630200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr16:48627200-48630200 Weak transcription Right Ventricle heart
39 chr16:48627200-48630600 Weak transcription Aorta Aorta
40 chr16:48627200-48631600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr16:48627200-48631600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr16:48627200-48631600 Weak transcription Osteobl bone
43 chr16:48627400-48629600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr16:48627400-48629800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
45 chr16:48627400-48629800 Weak transcription Primary T helper cells fromperipheralblood blood
46 chr16:48627400-48629800 Weak transcription Liver Liver
47 chr16:48627400-48630000 Weak transcription Primary T cells from cord blood blood
48 chr16:48627400-48630000 Weak transcription Adipose Nuclei Adipose
49 chr16:48627400-48630000 Weak transcription Fetal Heart heart
50 chr16:48627400-48630200 Weak transcription Duodenum Mucosa Duodenum

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015