The 2.0 version of rSNPBase

Variant report

Variant rs9936360
Chromosome Location chr16:48617610-48617611
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:48583800-48617800 Weak transcription H9 Cell Line embryonic stem cell
2 chr16:48594000-48617800 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr16:48595200-48624000 Weak transcription H1 Cell Line embryonic stem cell
4 chr16:48596000-48624400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr16:48596800-48624400 Weak transcription iPS-20b Cell Line embryonic stem cell
6 chr16:48605000-48630200 Weak transcription Spleen Spleen
7 chr16:48609800-48624200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr16:48609800-48624200 Weak transcription Fetal Thymus thymus
9 chr16:48609800-48624400 Weak transcription Thymus Thymus
10 chr16:48610000-48617800 Weak transcription Fetal Heart heart
11 chr16:48611000-48624400 Weak transcription Psoas Muscle Psoas
12 chr16:48611000-48624400 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr16:48611400-48617800 Weak transcription Brain Cingulate Gyrus brain
14 chr16:48611800-48626000 Weak transcription Aorta Aorta
15 chr16:48612000-48619200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
16 chr16:48612200-48624200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
17 chr16:48612400-48621000 Weak transcription Ovary ovary
18 chr16:48612400-48624400 Weak transcription Esophagus oesophagus
19 chr16:48612400-48630200 Weak transcription Gastric stomach
20 chr16:48612800-48618400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr16:48613000-48620000 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chr16:48613200-48617800 Weak transcription Right Ventricle heart
23 chr16:48613200-48621000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
24 chr16:48615200-48624400 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr16:48615600-48622600 Weak transcription HUVEC blood vessel
26 chr16:48615600-48624400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
27 chr16:48615600-48624400 Weak transcription Monocytes-CD14+_RO01746 blood
28 chr16:48615800-48618000 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
29 chr16:48616000-48617800 Weak transcription Fetal Lung lung
30 chr16:48616200-48617800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr16:48616200-48617800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr16:48616200-48618000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr16:48616200-48618000 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr16:48616200-48618400 Weak transcription Primary T helper naive cells from peripheral blood blood
35 chr16:48616400-48624400 Weak transcription HepG2 liver
36 chr16:48616600-48618000 Enhancers Left Ventricle heart
37 chr16:48616600-48618200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
38 chr16:48616600-48618600 Enhancers HSMMtube muscle
39 chr16:48616600-48624400 Weak transcription Primary B cells from cord blood blood
40 chr16:48616800-48619000 Enhancers NHDF-Ad bronchial
41 chr16:48616800-48620200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr16:48617000-48617800 Weak transcription Sigmoid Colon Sigmoid Colon
43 chr16:48617000-48619600 Weak transcription Lung lung
44 chr16:48617000-48620200 Weak transcription Primary T helper cells fromperipheralblood blood
45 chr16:48617000-48624200 Weak transcription Primary hematopoietic stem cells short term culture blood
46 chr16:48617200-48617800 Enhancers NHEK skin
47 chr16:48617200-48618000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr16:48617200-48618200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr16:48617200-48618200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
50 chr16:48617200-48618200 Enhancers Right Atrium heart

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Last update: Aug 31, 2015