The 2.0 version of rSNPBase

Variant report

Variant rs9952471
Chromosome Location chr18:43636391-43636392
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:43608600-43651000 Weak transcription Esophagus oesophagus
2 chr18:43631200-43636600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
3 chr18:43632200-43640400 Weak transcription Fetal Intestine Small intestine
4 chr18:43632400-43638400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr18:43632400-43642000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr18:43632400-43642200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr18:43632400-43651200 Weak transcription Pancreas Pancrea
8 chr18:43632600-43641800 Weak transcription NHEK skin
9 chr18:43633000-43640400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr18:43633200-43651200 Weak transcription HSMMtube muscle
11 chr18:43633400-43650200 Weak transcription NHLF lung
12 chr18:43633600-43640400 Weak transcription Fetal Adrenal Gland Adrenal Gland
13 chr18:43633800-43647600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr18:43634200-43636400 Enhancers Primary T helper naive cells from peripheral blood blood
15 chr18:43634600-43636600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
16 chr18:43634600-43637600 Enhancers Primary T cells fromperipheralblood blood
17 chr18:43634800-43636400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
18 chr18:43635000-43636400 Enhancers Primary T helper 17 cells PMA-I stimulated --
19 chr18:43635000-43636400 Enhancers Primary T killer naive cells fromperipheralblood blood
20 chr18:43635000-43636400 Enhancers Primary T killer memory cells from peripheral blood blood
21 chr18:43635000-43636400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr18:43635000-43636400 Enhancers Primary mononuclear cells fromperipheralblood Blood
23 chr18:43635000-43636400 Enhancers Spleen Spleen
24 chr18:43635000-43636400 Flanking Active TSS Dnd41 blood
25 chr18:43635000-43636400 Enhancers K562 blood
26 chr18:43635000-43636400 Enhancers Monocytes-CD14+_RO01746 blood
27 chr18:43635000-43636600 Enhancers GM12878-XiMat blood
28 chr18:43635000-43636800 Enhancers Primary T helper cells PMA-I stimulated --
29 chr18:43635000-43636800 Enhancers Primary T helper cells fromperipheralblood blood
30 chr18:43635000-43637200 Enhancers Primary neutrophils fromperipheralblood blood
31 chr18:43635000-43637200 Enhancers Fetal Thymus thymus
32 chr18:43635200-43636400 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr18:43635200-43636400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
34 chr18:43635200-43636400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr18:43635200-43636600 Enhancers Primary T helper naive cells fromperipheralblood blood
36 chr18:43635200-43636600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
37 chr18:43635200-43636600 Enhancers Thymus Thymus
38 chr18:43635400-43636400 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
39 chr18:43635800-43636600 Enhancers Primary hematopoietic stem cells blood
40 chr18:43636000-43637000 Enhancers Primary Natural Killer cells fromperipheralblood blood
41 chr18:43636200-43636400 Enhancers Liver Liver
42 chr18:43636200-43640400 Weak transcription Primary monocytes fromperipheralblood blood
43 chr18:43636200-43640800 Weak transcription Skeletal Muscle Male skeletal muscle
44 chr18:43636200-43641400 Weak transcription Breast Myoepithelial Primary Cells Breast
45 chr18:43636200-43644000 Weak transcription Osteobl bone

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Last update: Aug 31, 2015