Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10015329	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10030271	1.00[EUR][1000 genomes]
rs10032722	1.00[EUR][1000 genomes]
rs10033168	0.92[AFR][1000 genomes]
rs28477723	1.00[EUR][1000 genomes]
rs28593761	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28609508	0.87[AMR][1000 genomes]
rs28688606	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28789510	1.00[EUR][1000 genomes]
rs3857032	1.00[EUR][1000 genomes]
rs60044645	0.85[AMR][1000 genomes]
rs61430959	1.00[EUR][1000 genomes]
rs6553584	1.00[EUR][1000 genomes]
rs6834658	1.00[EUR][1000 genomes]
rs7356203	0.81[YRI][hapmap];0.85[AMR][1000 genomes]
rs73867280	1.00[EUR][1000 genomes]
rs73870705	1.00[EUR][1000 genomes]
rs7661178	1.00[EUR][1000 genomes]
rs7685990	1.00[EUR][1000 genomes]
rs7686411	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1034055	chr4:172405998-172500475	Weak transcription Enhancers Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a
2	nsv1016311	chr4:172405998-172502210	Enhancers Weak transcription Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a
3	nsv1026605	chr4:172405998-172506536	Enhancers Weak transcription Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a
4	nsv1022077	chr4:172460997-172609297	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
5	nsv537356	chr4:172460997-172609297	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:172500000-172502200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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