Variant report

Variant	esv1813777
Chromosome Location	chr15:78111702-78119345
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:495)
CpG islands
(count:550)
Chromatin interactive
region (count:19)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:495 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BACH1	chr15:78111596-78111934	H1-hESC	embryonic stem cell:	n/a	n/a
2	BACH1	chr15:78112581-78112794	H1-hESC	embryonic stem cell:	n/a	n/a
3	BHLHE40	chr15:78112561-78112947	K562	blood:	n/a	n/a
4	BHLHE40	chr15:78113211-78113483	K562	blood:	n/a	chr15:78113370-78113391 chr15:78113374-78113387
5	BHLHE40	chr15:78113815-78114121	K562	blood:	n/a	chr15:78113828-78113844
6	BRCA1	chr15:78116340-78116364	Hela-S3	cervix:	n/a	n/a
7	CCNT2	chr15:78112531-78112910	K562	blood:	n/a	n/a
8	CHD1	chr15:78111718-78111742	H1-hESC	embryonic stem cell:	n/a	n/a
9	CHD2	chr15:78112731-78112878	Hela-S3	cervix:	n/a	n/a
10	CHD2	chr15:78112768-78112882	H1-hESC	embryonic stem cell:	n/a	n/a
11	CHD2	chr15:78114017-78114116	K562	blood:	n/a	n/a
12	CREB1	chr15:78112210-78112963	A549	lung:	n/a	n/a
13	CTBP2	chr15:78111581-78112011	H1-hESC	embryonic stem cell:	n/a	n/a
14	CTCF	chr15:78112665-78112905	NHEK	skin:	n/a	chr15:78112771-78112781
15	CTCF	chr15:78113940-78114090	GM12872	blood:	n/a	chr15:78113982-78114000
16	CTCF	chr15:78113400-78113690	GM12873	blood:	n/a	n/a
17	CTCF	chr15:78112680-78112830	GM12867	blood:	n/a	chr15:78112771-78112781
18	CTCF	chr15:78114230-78114324	GM19239	blood:	n/a	n/a
19	CTCF	chr15:78113920-78114070	BE2_C	brain:	n/a	chr15:78113982-78114000
20	CTCF	chr15:78113871-78114151	GM10266	blood:	n/a	chr15:78113982-78114000
21	CTCF	chr15:78112700-78112850	AG04449	skin:	n/a	chr15:78112771-78112781
22	CTCF	chr15:78113920-78114070	HCT-116	colon:	n/a	chr15:78113982-78114000
23	CTCF	chr15:78113783-78114184	GM12878	blood:	n/a	chr15:78113982-78114000
24	CTCF	chr15:78112660-78112810	AG04449	skin:	n/a	chr15:78112771-78112781
25	CTCF	chr15:78113850-78114154	Fibrobl	skin:	n/a	chr15:78113982-78114000
26	CTCF	chr15:78112700-78112850	HCFaa	heart:	n/a	chr15:78112771-78112781
27	CTCF	chr15:78112678-78112851	SK-N-SH_RA	brain:	n/a	chr15:78112771-78112781
28	CTCF	chr15:78112601-78112851	T-47D	breast:	n/a	chr15:78112615-78112628 chr15:78112615-78112624 chr15:78112771-78112781
29	CTCF	chr15:78113900-78114050	HCFaa	heart:	n/a	chr15:78113982-78114000
30	CTCF	chr15:78113920-78114070	HCPEpiC	choroid plexus:	n/a	chr15:78113982-78114000
31	CTCF	chr15:78112595-78112843	A549	lung:	n/a	chr15:78112615-78112628 chr15:78112615-78112624 chr15:78112771-78112781
32	CTCF	chr15:78113900-78114050	AG10803	skin:	n/a	chr15:78113982-78114000
33	CTCF	chr15:78113871-78114134	MCF-7	breast:	n/a	chr15:78113982-78114000
34	CTCF	chr15:78113751-78114144	T-47D	breast:	n/a	chr15:78113982-78114000
35	CTCF	chr15:78113920-78114070	WI-38	lung:	n/a	chr15:78113982-78114000
36	CTCF	chr15:78113940-78114090	AG09309	skin:	n/a	chr15:78113982-78114000
37	CTCF	chr15:78112627-78112951	MCF-7	breast:	n/a	chr15:78112771-78112781
38	CTCF	chr15:78115940-78116090	A549	lung:	n/a	n/a
39	CTCF	chr15:78113900-78114050	AoAF	blood vessel:	n/a	chr15:78113982-78114000
40	CTCF	chr15:78113140-78113290	HEK293	kidney:	n/a	n/a
41	CTCF	chr15:78112720-78112870	HRE	kidney:	n/a	chr15:78112771-78112781
42	CTCF	chr15:78112680-78112830	GM12868	blood:	n/a	chr15:78112771-78112781
43	CTCF	chr15:78113820-78114194	ECC-1	luminal epithelium:	n/a	chr15:78113982-78114000
44	CTCF	chr15:78113849-78114158	Gliobla	brain:	n/a	chr15:78113982-78114000
45	CTCF	chr15:78113920-78114070	GM12801	blood:	n/a	chr15:78113982-78114000
46	CTCF	chr15:78113100-78113250	GM06990	blood:	n/a	n/a
47	CTCF	chr15:78114117-78114122	GM13976	blood:	n/a	n/a
48	CTCF	chr15:78113920-78114070	AG09309	skin:	n/a	chr15:78113982-78114000
49	CTCF	chr15:78112700-78112850	SAEC	small airway:	n/a	chr15:78112771-78112781
50	CTCF	chr15:78113915-78114105	Lung_OC	lung:	n/a	chr15:78113982-78114000

(count:550 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:78113667-78113717	AG10803	skin:	n/a
2	chr15:78113667-78113717	AG10803	skin:	n/a
3	chr15:78113667-78113717	HIPEpiC	eye:	n/a
4	chr15:78112026-78112076	HCPEpiC	choroid plexus:	n/a
5	chr15:78113237-78113287	HRPEpiC	eye:	n/a
6	chr15:78112818-78112868	HCF	heart:	n/a
7	chr15:78112847-78112897	NB4	blood:	n/a
8	chr15:78112847-78112897	HepG2	liver:	n/a
9	chr15:78113667-78113717	HMEC	breast:	n/a
10	chr15:78114278-78114328	ovcar-3	ovarian:	n/a
11	chr15:78113237-78113287	SK-N-SH	brain:	n/a
12	chr15:78114888-78114938	SK-N-SH_RA	brain:	n/a
13	chr15:78114888-78114938	HIPEpiC	eye:	n/a
14	chr15:78113237-78113287	BJ	skin:	n/a
15	chr15:78113237-78113287	AG10803	skin:	n/a
16	chr15:78113667-78113717	U87	brain:	n/a
17	chr15:78112026-78112076	SK-N-SH_RA	brain:	n/a
18	chr15:78114278-78114328	RPTEC	kidney:	n/a
19	chr15:78111830-78111880	CMK	blood:	n/a
20	chr15:78114888-78114938	NHBE	bronchial:	n/a
21	chr15:78112818-78112868	K562	blood:	n/a
22	chr15:78112818-78112868	SKMC	muscle:	n/a
23	chr15:78118816-78118866	HEK293	kidney:	embryo
24	chr15:78111830-78111880	U87	brain:	n/a
25	chr15:78111830-78111880	BE2_C	brain:	n/a
26	chr15:78112026-78112076	ovcar-3	ovarian:	n/a
27	chr15:78111830-78111880	ECC-1	luminal epithelium:	n/a
28	chr15:78112847-78112897	NHBE	bronchial:	n/a
29	chr15:78114278-78114328	HMEC	breast:	n/a
30	chr15:78114278-78114328	NT2-D1	testis:	n/a
31	chr15:78114888-78114938	NB4	blood:	n/a
32	chr15:78114888-78114938	HepG2	liver:	n/a
33	chr15:78118816-78118866	SK-N-SH	brain:	n/a
34	chr15:78118816-78118866	GM12878	blood:	n/a
35	chr15:78113667-78113717	HRCEpiC	kidney:	n/a
36	chr15:78112026-78112076	RPTEC	kidney:	n/a
37	chr15:78112847-78112897	HRCEpiC	kidney:	n/a
38	chr15:78113667-78113717	SK-N-MC	brain:	n/a
39	chr15:78113237-78113287	HCF	heart:	n/a
40	chr15:78112847-78112897	Jurkat	blood:	n/a
41	chr15:78111830-78111880	HCF	heart:	n/a
42	chr15:78118816-78118866	BJ	skin:	n/a
43	chr15:78113667-78113717	SAEC	small airway:	n/a
44	chr15:78114888-78114938	NH-A	brain:	n/a
45	chr15:78114888-78114938	Hela-S3	cervix:	n/a
46	chr15:78111830-78111880	HRPEpiC	eye:	n/a
47	chr15:78113667-78113717	Hela-S3	cervix:	n/a
48	chr15:78111830-78111880	HEEpiC	esophagus:	n/a
49	chr15:78112847-78112897	GM12878	blood:	n/a
50	chr15:78114888-78114938	AG04449	skin:	fetal

(count:19 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr15:77925397..77927315-chr15:78112259..78115116,2	K562	blood:
2	chr15:78109668..78112280-chr15:78112604..78115106,3	MCF-7	breast:
3	chr15:77925299..77927652-chr15:78112444..78114100,3	MCF-7	breast:
4	chr15:77835732..77836546-chr15:78113747..78114395,2	MCF-7	breast:
5	chr15:77923251..77928296-chr15:78111448..78115771,8	MCF-7	breast:
6	chr15:78109668..78112280-chr15:78112604..78115106,3	MCF-7	breast:
7	chr15:78115470..78116424-chr15:78167241..78167877,2	MCF-7	breast:
8	chr15:77951738..77952728-chr15:78113529..78114461,5	K562	blood:
9	chr15:77925397..77928069-chr15:78112259..78116246,3	K562	blood:
10	chr15:77951840..77952665-chr15:78112887..78114250,4	MCF-7	breast:
11	chr15:77951785..77952749-chr15:78113535..78114168,4	MCF-7	breast:
12	chr15:77925249..77927257-chr15:78113205..78115049,24	MCF-7	breast:
13	chr15:77950482..77951067-chr15:78113646..78114389,2	K562	blood:
14	chr15:77925072..77927787-chr15:78111223..78115888,59	MCF-7	breast:
15	chr15:78116064..78118754-chr15:78122840..78125004,2	MCF-7	breast:
16	chr15:78118529..78120395-chr15:78122461..78124625,2	K562	blood:
17	chr15:77925435..77927439-chr15:78112259..78115090,22	K562	blood:
18	chr15:78115466..78118484-chr15:78120011..78123409,3	MCF-7	breast:
19	chr15:77411244..77411752-chr15:78113897..78114465,2	K562	blood:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-TBC1D2B-7	chr15:78112376-78112566	NONHSAT047460
2	lnc-TBC1D2B-7	chr15:78111613-78111870	NONHSAT047458
3	lnc-TBC1D2B-7	chr15:78113121-78113196	NONHSAT047459

No data

Variant related genes	Relation type
LINGO1	TF binding region
LINGO1	CpG island
ENSG00000169783	chromatin interactions
ENSG00000259281	chromatin interactions

Extended variants
information (count: 294 )
Associated
traits (count: 52 )

Variant overlapped rSNPs/rCNVs (count:294 , 50 per page) page: 1 2 3 4 5 6

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs372187360	chr15:78111723-78111724	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent Enhancer	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
2	rs553992491	chr15:78111743-78111744	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent Enhancer	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
3	rs561620983	chr15:78111787-78111788	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent Enhancer	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
4	rs189759565	chr15:78111797-78111798	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
5	rs565542642	chr15:78111824-78111825	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
6	rs536214865	chr15:78111874-78111875	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs554381935	chr15:78111882-78111883	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs143130993	chr15:78111915-78111916	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs113747076	chr15:78111924-78111925	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs575767569	chr15:78111929-78111930	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs7497690	chr15:78111981-78111982	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs543093259	chr15:78111999-78112000	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs55953854	chr15:78112058-78112059	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers	TF binding region CpG island Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs577807521	chr15:78112143-78112144	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs7182763	chr15:78112151-78112152	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs560793934	chr15:78112184-78112185	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs534884837	chr15:78112228-78112229	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs572372510	chr15:78112232-78112233	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs56061966	chr15:78112233-78112234	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs550285306	chr15:78112234-78112235	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Bivalent Enhancer	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs376544923	chr15:78112418-78112419	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
22	rs565081708	chr15:78112496-78112497	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
23	rs532287133	chr15:78112522-78112523	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
24	rs112033856	chr15:78112524-78112525	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
25	rs112762918	chr15:78112550-78112551	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
26	rs148756623	chr15:78112607-78112608	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs536139326	chr15:78112623-78112624	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs548197962	chr15:78112640-78112641	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs569307823	chr15:78112708-78112709	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs536790759	chr15:78112720-78112721	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs74481055	chr15:78112733-78112734	Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs577821892	chr15:78112804-78112805	Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs539488295	chr15:78112805-78112806	Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs187054427	chr15:78112814-78112815	Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs554185780	chr15:78112823-78112824	Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Active TSS Weak transcription	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs572735358	chr15:78112922-78112923	Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs542947068	chr15:78112933-78112934	Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs561303400	chr15:78112934-78112935	Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs79472843	chr15:78112936-78112937	Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs191971658	chr15:78112985-78112986	Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
41	rs565350743	chr15:78113007-78113008	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Enhancers Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs549249652	chr15:78113030-78113031	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Enhancers Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs532222082	chr15:78113042-78113043	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Enhancers Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs547603356	chr15:78113130-78113131	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Enhancers Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
45	rs546364716	chr15:78113179-78113180	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Enhancers Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
46	rs559262630	chr15:78113250-78113251	Bivalent Enhancer Enhancers Active TSS Bivalent/Poised TSS Weak transcription	TF binding region CpG island Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs530052884	chr15:78113343-78113344	Bivalent Enhancer Enhancers Active TSS Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs548070652	chr15:78113350-78113351	Bivalent Enhancer Enhancers Active TSS Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs569319996	chr15:78113368-78113369	Bivalent Enhancer Enhancers Active TSS Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs151302891	chr15:78113392-78113393	Bivalent Enhancer Enhancers Active TSS Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:52)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Wilms tumour	21544195	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Melanoma	18172304	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Prostate cancer	18632612	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Cancer	16751803	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Breast cancer	17133270	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	17322880	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Lung cancer	18438408	CNVD
Myelofibrosis	22110671	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Papillary thyroid carcinoma	22161024	CNVD
Autism	21480499	CNVD
Breast cancer	17603634	CNVD
Acute myeloid leukemia	16864856	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
small cell lung cancer	20016488	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:256 , 50 per page) page: 1 2 3 4 5 6

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:78109800-78111800	Bivalent Enhancer	Spleen	Spleen
2	chr15:78110600-78111800	Bivalent Enhancer	Placenta	Placenta
3	chr15:78110600-78112800	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
4	chr15:78110600-78112800	Bivalent/Poised TSS	Brain Cingulate Gyrus	brain
5	chr15:78110600-78113000	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
6	chr15:78110600-78113000	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
7	chr15:78110600-78113200	Active TSS	Brain Angular Gyrus	brain
8	chr15:78110800-78112800	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
9	chr15:78110800-78112800	Bivalent/Poised TSS	iPS DF 6.9 Cell Line	embryonic stem cell
10	chr15:78110800-78113000	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
11	chr15:78111000-78112600	Transcr. at gene 5' and 3'	iPS DF 19.11 Cell Line	embryonic stem cell
12	chr15:78111000-78112600	Active TSS	Fetal Brain Female	brain
13	chr15:78111000-78112800	Active TSS	H9 Cell Line	embryonic stem cell
14	chr15:78111000-78112800	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
15	chr15:78111000-78112800	Bivalent/Poised TSS	Brain Hippocampus Middle	brain
16	chr15:78111000-78112800	Bivalent/Poised TSS	Ovary	ovary
17	chr15:78111000-78113000	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
18	chr15:78111000-78113600	Active TSS	Brain Inferior Temporal Lobe	brain
19	chr15:78111200-78112200	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
20	chr15:78111200-78112600	Bivalent/Poised TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
21	chr15:78111200-78112600	Bivalent/Poised TSS	ES-UCSF4 Cell Line	embryonic stem cell
22	chr15:78111200-78112600	Bivalent/Poised TSS	Foreskin Fibroblast Primary Cells skin01	Skin
23	chr15:78111200-78112600	Bivalent/Poised TSS	Fetal Intestine Small	intestine
24	chr15:78111200-78112600	Bivalent/Poised TSS	Thymus	Thymus
25	chr15:78111200-78112800	Bivalent/Poised TSS	H1 Cell Line	embryonic stem cell
26	chr15:78111200-78112800	Bivalent/Poised TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
27	chr15:78111200-78112800	Bivalent/Poised TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
28	chr15:78111200-78112800	Enhancers	Primary B cells from cord blood	blood
29	chr15:78111200-78112800	Flanking Bivalent TSS/Enh	Foreskin Melanocyte Primary Cells skin03	Skin
30	chr15:78111200-78112800	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
31	chr15:78111200-78112800	Bivalent/Poised TSS	A549	lung
32	chr15:78111200-78113000	Active TSS	Brain Anterior Caudate	brain
33	chr15:78111400-78111800	Bivalent/Poised TSS	Cortex derived primary cultured neurospheres	brain
34	chr15:78111400-78111800	Transcr. at gene 5' and 3'	Right Atrium	heart
35	chr15:78111400-78112600	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
36	chr15:78111400-78112600	Bivalent/Poised TSS	Foreskin Melanocyte Primary Cells skin01	Skin
37	chr15:78111400-78112600	Bivalent/Poised TSS	Aorta	Aorta
38	chr15:78111400-78112600	Bivalent/Poised TSS	Brain Germinal Matrix	brain
39	chr15:78111400-78112600	Bivalent/Poised TSS	Duodenum Smooth Muscle	Duodenum
40	chr15:78111400-78112600	Bivalent/Poised TSS	Pancreatic Islets	Pancreatic Islet
41	chr15:78111600-78111800	Bivalent Enhancer	Muscle Satellite Cultured Cells	--
42	chr15:78111600-78111800	Bivalent/Poised TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
43	chr15:78111600-78111800	Bivalent/Poised TSS	Fetal Lung	lung
44	chr15:78111600-78111800	Flanking Bivalent TSS/Enh	Lung	lung
45	chr15:78111600-78111800	Flanking Bivalent TSS/Enh	Rectal Mucosa Donor 29	rectum
46	chr15:78111600-78111800	Bivalent/Poised TSS	Skeletal Muscle Male	skeletal muscle
47	chr15:78111600-78111800	Bivalent/Poised TSS	Stomach Smooth Muscle	stomach
48	chr15:78111600-78111800	Bivalent/Poised TSS	HUVEC	blood vessel
49	chr15:78111600-78112000	Flanking Bivalent TSS/Enh	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
50	chr15:78111600-78112000	Flanking Bivalent TSS/Enh	H9 Derived Neuron Cultured Cells	ES cell derived

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