Variant report

Variant	esv3317299
Chromosome Location	chr18:11855697-11856801
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr18:11856004-11856621	HepG2	liver:	n/a	n/a
2	BHLHE40	chr18:11856366-11856583	K562	blood:	n/a	n/a
3	BRCA1	chr18:11856348-11856472	HepG2	liver:	n/a	n/a
4	CREB1	chr18:11856323-11856533	A549	lung:	n/a	n/a
5	CTCF	chr18:11856300-11856450	HepG2	liver:	n/a	n/a
6	CTCF	chr18:11856200-11856350	HBMEC	blood vessel:	n/a	n/a
7	FOXA1	chr18:11856343-11856762	A549	lung:	n/a	n/a
8	FOXA2	chr18:11856411-11856679	HepG2	liver:	n/a	n/a
9	GABPA	chr18:11855982-11856173	HepG2	liver:	n/a	n/a
10	GABPA	chr18:11855997-11856266	A549	lung:	n/a	n/a
11	HEY1	chr18:11856058-11856246	HepG2	liver:	n/a	n/a
12	HEY1	chr18:11855930-11856389	HepG2	liver:	n/a	n/a
13	HEY1	chr18:11856409-11856599	HepG2	liver:	n/a	n/a
14	HNF4A	chr18:11855893-11856297	HepG2	liver:	n/a	chr18:11856126-11856134 chr18:11856119-11856134 chr18:11856121-11856133 chr18:11856127-11856142 chr18:11856128-11856136 chr18:11856127-11856141 chr18:11856125-11856143 chr18:11856121-11856133
15	HNF4A	chr18:11855952-11856258	HepG2	liver:	n/a	chr18:11856126-11856134 chr18:11856119-11856134 chr18:11856121-11856133 chr18:11856127-11856142 chr18:11856128-11856136 chr18:11856127-11856141 chr18:11856125-11856143 chr18:11856121-11856133
16	HNF4G	chr18:11855977-11856276	HepG2	liver:	n/a	chr18:11856126-11856134 chr18:11856125-11856140 chr18:11856121-11856133 chr18:11856127-11856142 chr18:11856128-11856136 chr18:11856127-11856141 chr18:11856125-11856143 chr18:11856121-11856133
17	MAX	chr18:11855997-11856085	NB4	blood:	n/a	n/a
18	MAZ	chr18:11856417-11856507	HepG2	liver:	n/a	n/a
19	MXI1	chr18:11856053-11856577	HepG2	liver:	n/a	n/a
20	MYC	chr18:11856030-11856147	NB4	blood:	n/a	n/a
21	NR3C1	chr18:11856289-11856764	A549	lung:	n/a	chr18:11856585-11856592 chr18:11856556-11856563
22	NR3C1	chr18:11856280-11856751	A549	lung:	n/a	chr18:11856585-11856592 chr18:11856556-11856563
23	NR3C1	chr18:11856241-11856804	A549	lung:	n/a	chr18:11856585-11856592 chr18:11856556-11856563
24	NR3C1	chr18:11856343-11856683	A549	lung:	n/a	chr18:11856585-11856592 chr18:11856556-11856563
25	POLR2A	chr18:11849544-11856636	Hela-S3	cervix:	n/a	n/a
26	POLR2A	chr18:11856288-11856571	A549	lung:	n/a	n/a
27	POLR2A	chr18:11855995-11856598	HepG2	liver:	n/a	n/a
28	POLR2A	chr18:11856228-11856621	A549	lung:	n/a	n/a
29	POLR2A	chr18:11849742-11860299	MCF10A-Er-Src	breast:	n/a	n/a
30	POLR2A	chr18:11856591-11856838	HepG2	liver:	n/a	n/a
31	POLR2A	chr18:11856008-11856306	HepG2	liver:	n/a	n/a
32	POLR2A	chr18:11849706-11860430	MCF10A-Er-Src	breast:	n/a	n/a
33	POLR2A	chr18:11855986-11856331	HepG2	liver:	n/a	n/a
34	POLR2A	chr18:11856248-11856612	ECC-1	luminal epithelium:	n/a	n/a
35	POLR2A	chr18:11856314-11856345	GM12878	blood:	n/a	n/a
36	POLR2A	chr18:11856399-11856542	K562	blood:	n/a	n/a
37	POLR2A	chr18:11856288-11856550	Hela-S3	cervix:	n/a	n/a
38	POLR2A	chr18:11849786-11855757	A549	lung:	n/a	n/a
39	POLR2A	chr18:11856428-11856514	GM12878	blood:	n/a	n/a
40	POLR2A	chr18:11848810-11859649	IMR90	lung:	n/a	n/a
41	POLR2A	chr18:11856282-11856560	A549	lung:	n/a	n/a
42	POLR2A	chr18:11854134-11856764	K562	blood:	n/a	n/a
43	POLR2A	chr18:11856304-11856451	A549	lung:	n/a	n/a
44	POLR2A	chr18:11856194-11856654	Hela-S3	cervix:	n/a	n/a
45	POLR2A	chr18:11855957-11856665	A549	lung:	n/a	n/a
46	SPI1	chr18:11855988-11856127	K562	blood:	n/a	chr18:11856082-11856089
47	SPI1	chr18:11855971-11856341	HL-60	blood:	n/a	chr18:11856082-11856089
48	ZKSCAN1	chr18:11856400-11856526	Hela-S3	cervix:	n/a	n/a
49	ZNF143	chr18:11856374-11856449	Hela-S3	cervix:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr18:11855656-11855706	HUVEC	blood vessel:	n/a
2	chr18:11855656-11855706	HCM	heart:	n/a
3	chr18:11855656-11855706	HMEC	breast:	n/a
4	chr18:11855656-11855706	NHBE	bronchial:	n/a
5	chr18:11855656-11855706	ProgFib	skin:	n/a
6	chr18:11855656-11855706	ovcar-3	ovarian:	n/a
7	chr18:11855656-11855706	HIPEpiC	eye:	n/a
8	chr18:11855656-11855706	H1-hESC	embryonic stem cell:	embryo
9	chr18:11855656-11855706	A549	lung:	n/a
10	chr18:11855656-11855706	MCF-7	breast:	n/a
11	chr18:11855656-11855706	SAEC	small airway:	n/a
12	chr18:11855656-11855706	Hela-S3	cervix:	n/a
13	chr18:11855656-11855706	Hepatocyte	liver:	n/a
14	chr18:11855656-11855706	AG09309	skin:	n/a
15	chr18:11855656-11855706	GM12878	blood:	n/a
16	chr18:11855656-11855706	Caco-2	colon:	n/a
17	chr18:11855656-11855706	HRE	kidney:	n/a
18	chr18:11855656-11855706	HPAEpiC	pulmonary alveolar:	n/a
19	chr18:11855656-11855706	GM12892	blood:	n/a
20	chr18:11855656-11855706	HepG2	liver:	n/a
21	chr18:11855656-11855706	PFSK-1	brain:	n/a
22	chr18:11855656-11855706	HEK293	kidney:	embryo
23	chr18:11855656-11855706	HCF	heart:	n/a
24	chr18:11855656-11855706	HAEpiC	amniotic membrane:	n/a
25	chr18:11855656-11855706	SK-N-SH	brain:	n/a
26	chr18:11855656-11855706	GM06990	blood:	n/a
27	chr18:11855656-11855706	GM12891	blood:	n/a
28	chr18:11855656-11855706	SK-N-SH_RA	brain:	n/a
29	chr18:11855656-11855706	AG09319	gingival:	n/a
30	chr18:11855656-11855706	HEEpiC	esophagus:	n/a
31	chr18:11855656-11855706	AG10803	skin:	n/a
32	chr18:11855656-11855706	SK-N-MC	brain:	n/a
33	chr18:11855656-11855706	IMR90	lung:	fetal
34	chr18:11855656-11855706	BJ	skin:	n/a
35	chr18:11855656-11855706	LNCaP	prostate:	n/a
36	chr18:11855656-11855706	HRPEpiC	eye:	n/a
37	chr18:11855656-11855706	AoSMC	blood vessel:	n/a
38	chr18:11855656-11855706	K562	blood:	n/a
39	chr18:11855656-11855706	NHDF-neo	bronchial:	n/a
40	chr18:11855656-11855706	PANC-1	pancreas:	n/a
41	chr18:11855656-11855706	MCF10A-Er-Src	breast:	n/a
42	chr18:11855656-11855706	RPTEC	kidney:	n/a
43	chr18:11855656-11855706	HCPEpiC	choroid plexus:	n/a
44	chr18:11855656-11855706	HL-60	blood:	n/a
45	chr18:11855656-11855706	AG04449	skin:	fetal
46	chr18:11855656-11855706	U87	brain:	n/a
47	chr18:11855656-11855706	ECC-1	luminal epithelium:	n/a
48	chr18:11855656-11855706	BE2_C	brain:	n/a
49	chr18:11855656-11855706	Jurkat	blood:	n/a
50	chr18:11855656-11855706	NT2-D1	testis:	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr18:11848600..11852886-chr18:11853629..11859008,5	K562	blood:
2	chr18:11853727..11856399-chr18:11905762..11908760,2	K562	blood:

Variant related genes	Relation type
ENSG00000267165	TF binding region
GNAL	TF binding region
ENSG00000267165	CpG island
GNAL	CpG island
ENSG00000255112	chromatin interactions
ENSG00000267165	chromatin interactions
ENSG00000273141	chromatin interactions
ENSG00000154889	chromatin interactions

Extended variants
information (count: 55 )
Associated
traits (count: 58 )

Variant overlapped rSNPs/rCNVs (count:55 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs529065897	chr18:11855699-11855700	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
2	rs10048326	chr18:11855710-11855711	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	5 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs563771207	chr18:11855722-11855723	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
4	rs186648279	chr18:11855723-11855724	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
5	rs556593945	chr18:11855746-11855747	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
6	rs530918786	chr18:11855769-11855770	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
7	rs552558954	chr18:11855775-11855776	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
8	rs574938112	chr18:11855790-11855791	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
9	rs1249624	chr18:11855800-11855801	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	5 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs537448201	chr18:11855808-11855809	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
11	rs374706194	chr18:11855819-11855820	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
12	rs541940417	chr18:11855828-11855829	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
13	rs560597895	chr18:11855832-11855833	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
14	rs62097392	chr18:11855893-11855894	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	5 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs539635884	chr18:11855894-11855895	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
16	rs188997044	chr18:11855895-11855896	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
17	rs58273499	chr18:11855912-11855913	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	5 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs71367580	chr18:11855923-11855924	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
19	rs557286530	chr18:11855926-11855927	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
20	rs539303266	chr18:11856011-11856012	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
21	rs575256597	chr18:11856035-11856036	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
22	rs34827528	chr18:11856043-11856044	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
23	rs72351783	chr18:11856062-11856063	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
24	rs560849933	chr18:11856064-11856065	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
25	rs539159368	chr18:11856091-11856092	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
26	rs557475826	chr18:11856170-11856171	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
27	rs376278233	chr18:11856190-11856191	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
28	rs572494491	chr18:11856196-11856197	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
29	rs574205733	chr18:11856201-11856202	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
30	rs539872476	chr18:11856209-11856210	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
31	rs181710582	chr18:11856222-11856223	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
32	rs573872125	chr18:11856240-11856241	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
33	rs186412372	chr18:11856253-11856254	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
34	rs145835189	chr18:11856276-11856277	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
35	rs368569302	chr18:11856277-11856278	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
36	rs533200077	chr18:11856297-11856298	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
37	rs552696867	chr18:11856319-11856320	Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
38	rs564605799	chr18:11856456-11856457	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs528471265	chr18:11856477-11856478	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs148977110	chr18:11856478-11856479	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
41	rs144704428	chr18:11856555-11856556	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs28545066	chr18:11856581-11856582	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs535782422	chr18:11856588-11856589	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs372637235	chr18:11856651-11856652	Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs112977431	chr18:11856678-11856679	Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs191222026	chr18:11856691-11856692	Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs539683468	chr18:11856693-11856694	Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs5018704	chr18:11856742-11856743	Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs5018703	chr18:11856745-11856746	Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs9635826	chr18:11856750-11856751	Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:58)

Disease	PMID	Source
Chronic lymphocytic leukemia	21546498	CNVD
Intellectual disability	22102821	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Acute myeloid leukemia	16864856	CNVD
Seminomas	18059402	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Kartagener syndrome	16639409	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Cancer	21183584	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Basal cell lymphoma	17053054	CNVD
Colorectal cancer	19359472	CNVD
Human rectal carcinomas	16397240	CNVD
Melanoma	18172304	CNVD
Colorectal cancer	16272173	CNVD
Colorectal cancer	19150955	CNVD
Follicular lymphoma	20505157	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	18923191	CNVD
Glioblastoma multiforme	21080181	CNVD
Cancer	21637783	CNVD
Medulloblastoma	21979893	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Trisomy 18 syndrome	17576883	CNVD
Autism	20808228	CNVD
lymphocytic leukemia	21291569	CNVD
Barrett''s syndrome	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Ewing''s sarcoma	17952124	CNVD
Multiple myeloma	17550852	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Breast cancer	21364760	CNVD
small cell lung cancer	20016488	CNVD
abnormal development	18461090	CNVD
Heart disease	21282601	CNVD
Glioblastoma multiforme	21922591	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Acute myeloid leukemia	17377590	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Developmental delay	21147756	CNVD
Lung cancer	18438408	CNVD
Breast cancer	16620391	CNVD
Myelofibrosis	22110671	CNVD
Retinoblastoma	21504564	CNVD
Glioma	17123091	CNVD
Neurodevelopmental disorder	22521361	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:190 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:11852200-11856200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr18:11852200-11856200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr18:11852400-11856200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr18:11852400-11857200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr18:11852400-11860000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
6	chr18:11852400-11880800	Weak transcription	Aorta	Aorta
7	chr18:11852600-11857000	Weak transcription	Fetal Muscle Trunk	muscle
8	chr18:11852800-11856200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
9	chr18:11853400-11856000	Weak transcription	HSMM	muscle
10	chr18:11853400-11856200	Weak transcription	H1 Cell Line	embryonic stem cell
11	chr18:11853400-11856200	Weak transcription	Colonic Mucosa	Colon
12	chr18:11853400-11856200	Weak transcription	Pancreas	Pancrea
13	chr18:11853400-11856400	Weak transcription	NHDF-Ad	bronchial
14	chr18:11853400-11857400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
15	chr18:11853400-11859200	Weak transcription	Placenta Amnion	Placenta Amnion
16	chr18:11853600-11856800	Weak transcription	Primary hematopoietic stem cells	blood
17	chr18:11853600-11857000	Weak transcription	HUES48 Cell Line	embryonic stem cell
18	chr18:11853600-11857000	Weak transcription	HUES64 Cell Line	embryonic stem cell
19	chr18:11853600-11857000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
20	chr18:11853600-11857000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
21	chr18:11853600-11857000	Weak transcription	Rectal Smooth Muscle	rectum
22	chr18:11853600-11857400	Weak transcription	H9 Cell Line	embryonic stem cell
23	chr18:11853600-11857400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
24	chr18:11853600-11857400	Weak transcription	Brain Cingulate Gyrus	brain
25	chr18:11853600-11857400	Weak transcription	Fetal Muscle Leg	muscle
26	chr18:11853600-11857600	Weak transcription	Fetal Thymus	thymus
27	chr18:11853600-11859200	Weak transcription	Right Ventricle	heart
28	chr18:11853600-11859600	Weak transcription	Brain Inferior Temporal Lobe	brain
29	chr18:11853600-11883800	Weak transcription	Ovary	ovary
30	chr18:11853800-11855800	Weak transcription	Stomach Mucosa	stomach
31	chr18:11853800-11855800	Weak transcription	Osteobl	bone
32	chr18:11853800-11856000	Weak transcription	HUES6 Cell Line	embryonic stem cell
33	chr18:11853800-11856000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
34	chr18:11853800-11856000	Weak transcription	GM12878-XiMat	blood
35	chr18:11853800-11856200	Weak transcription	Small Intestine	intestine
36	chr18:11853800-11856200	Weak transcription	HMEC	breast
37	chr18:11853800-11856200	Weak transcription	HUVEC	blood vessel
38	chr18:11853800-11856200	Weak transcription	NHLF	lung
39	chr18:11853800-11856400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
40	chr18:11853800-11856400	Weak transcription	HSMMtube	muscle
41	chr18:11853800-11857000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
42	chr18:11853800-11857000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
43	chr18:11853800-11857000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
44	chr18:11853800-11857000	Weak transcription	Adipose Nuclei	Adipose
45	chr18:11853800-11857000	Weak transcription	Pancreatic Islets	Pancreatic Islet
46	chr18:11853800-11857200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
47	chr18:11853800-11857200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
48	chr18:11853800-11857200	Weak transcription	Cortex derived primary cultured neurospheres	brain
49	chr18:11853800-11857200	Weak transcription	Brain Anterior Caudate	brain
50	chr18:11853800-11857200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links