The 2.0 version of rSNPBase

Variant report

Variant rs58273499
Chromosome Location chr18:11855912-11855913
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:11852200-11856200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr18:11852200-11856200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr18:11852400-11856200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr18:11852400-11857200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr18:11852400-11860000 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr18:11852400-11880800 Weak transcription Aorta Aorta
7 chr18:11852600-11857000 Weak transcription Fetal Muscle Trunk muscle
8 chr18:11852800-11856200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr18:11853400-11856000 Weak transcription HSMM muscle
10 chr18:11853400-11856200 Weak transcription H1 Cell Line embryonic stem cell
11 chr18:11853400-11856200 Weak transcription Colonic Mucosa Colon
12 chr18:11853400-11856200 Weak transcription Pancreas Pancrea
13 chr18:11853400-11856400 Weak transcription NHDF-Ad bronchial
14 chr18:11853400-11857400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr18:11853400-11859200 Weak transcription Placenta Amnion Placenta Amnion
16 chr18:11853600-11856800 Weak transcription Primary hematopoietic stem cells blood
17 chr18:11853600-11857000 Weak transcription HUES48 Cell Line embryonic stem cell
18 chr18:11853600-11857000 Weak transcription HUES64 Cell Line embryonic stem cell
19 chr18:11853600-11857000 Weak transcription iPS-15b Cell Line embryonic stem cell
20 chr18:11853600-11857000 Weak transcription iPS-18 Cell Line embryonic stem cell
21 chr18:11853600-11857000 Weak transcription Rectal Smooth Muscle rectum
22 chr18:11853600-11857400 Weak transcription H9 Cell Line embryonic stem cell
23 chr18:11853600-11857400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr18:11853600-11857400 Weak transcription Brain Cingulate Gyrus brain
25 chr18:11853600-11857400 Weak transcription Fetal Muscle Leg muscle
26 chr18:11853600-11857600 Weak transcription Fetal Thymus thymus
27 chr18:11853600-11859200 Weak transcription Right Ventricle heart
28 chr18:11853600-11859600 Weak transcription Brain Inferior Temporal Lobe brain
29 chr18:11853600-11883800 Weak transcription Ovary ovary
30 chr18:11853800-11856000 Weak transcription HUES6 Cell Line embryonic stem cell
31 chr18:11853800-11856000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
32 chr18:11853800-11856000 Weak transcription GM12878-XiMat blood
33 chr18:11853800-11856200 Weak transcription Small Intestine intestine
34 chr18:11853800-11856200 Weak transcription HMEC breast
35 chr18:11853800-11856200 Weak transcription HUVEC blood vessel
36 chr18:11853800-11856200 Weak transcription NHLF lung
37 chr18:11853800-11856400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr18:11853800-11856400 Weak transcription HSMMtube muscle
39 chr18:11853800-11857000 Weak transcription ES-I3 Cell Line embryonic stem cell
40 chr18:11853800-11857000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr18:11853800-11857000 Weak transcription iPS-20b Cell Line embryonic stem cell
42 chr18:11853800-11857000 Weak transcription Adipose Nuclei Adipose
43 chr18:11853800-11857000 Weak transcription Pancreatic Islets Pancreatic Islet
44 chr18:11853800-11857200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
45 chr18:11853800-11857200 Weak transcription Primary hematopoietic stem cells short term culture blood
46 chr18:11853800-11857200 Weak transcription Cortex derived primary cultured neurospheres brain
47 chr18:11853800-11857200 Weak transcription Brain Anterior Caudate brain
48 chr18:11853800-11857200 Weak transcription Fetal Adrenal Gland Adrenal Gland
49 chr18:11853800-11857200 Weak transcription Fetal Kidney kidney
50 chr18:11853800-11857200 Weak transcription K562 blood

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Last update: Aug 31, 2015