Variant report

Variant rs28696966
Chromosome Location chr18:11752736-11752737
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:11751000-11753200 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
2 chr18:11751200-11752800 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
3 chr18:11751200-11752800 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
4 chr18:11751200-11753000 Flanking Bivalent TSS/Enh Adipose Nuclei Adipose
5 chr18:11751200-11753200 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
6 chr18:11751200-11753200 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
7 chr18:11751200-11753200 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
8 chr18:11751400-11752800 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
9 chr18:11751400-11752800 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
10 chr18:11751400-11753000 Active TSS H9 Cell Line embryonic stem cell
11 chr18:11751400-11753000 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr18:11751400-11753000 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr18:11751400-11753000 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr18:11751400-11753200 Enhancers Liver Liver
15 chr18:11751600-11752800 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr18:11751600-11752800 Bivalent/Poised TSS Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr18:11751600-11752800 Bivalent/Poised TSS Thymus Thymus
18 chr18:11751600-11753000 Bivalent/Poised TSS ES-WA7 Cell Line embryonic stem cell
19 chr18:11751600-11753000 Bivalent/Poised TSS iPS DF 6.9 Cell Line embryonic stem cell
20 chr18:11751600-11753000 Bivalent Enhancer Primary T helper cells PMA-I stimulated --
21 chr18:11751600-11753000 Flanking Bivalent TSS/Enh Cortex derived primary cultured neurospheres brain
22 chr18:11751600-11753000 Bivalent/Poised TSS Ovary ovary
23 chr18:11751600-11753000 Bivalent/Poised TSS Psoas Muscle Psoas
24 chr18:11751600-11753000 Active TSS Rectal Smooth Muscle rectum
25 chr18:11751600-11753000 Active TSS Right Atrium heart
26 chr18:11751600-11753200 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
27 chr18:11751600-11753200 Bivalent/Poised TSS Brain Cingulate Gyrus brain
28 chr18:11751600-11756200 Active TSS Brain Anterior Caudate brain
29 chr18:11751800-11752800 Bivalent/Poised TSS Skeletal Muscle Male skeletal muscle
30 chr18:11751800-11753000 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr18:11751800-11753000 Active TSS Gastric stomach
32 chr18:11752000-11752800 Active TSS ES-UCSF4 Cell Line embryonic stem cell
33 chr18:11752000-11752800 Active TSS Breast Myoepithelial Primary Cells Breast
34 chr18:11752000-11752800 Active TSS Colon Smooth Muscle Colon
35 chr18:11752000-11753000 Bivalent Enhancer Primary neutrophils fromperipheralblood blood
36 chr18:11752000-11753000 Bivalent Enhancer Primary B cells from peripheral blood blood
37 chr18:11752000-11753000 Flanking Active TSS Pancreas Pancrea
38 chr18:11752000-11753200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr18:11752000-11753200 Bivalent Enhancer Primary T helper cells fromperipheralblood blood
40 chr18:11752200-11752800 Flanking Bivalent TSS/Enh H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr18:11752200-11752800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr18:11752200-11752800 Bivalent Enhancer Primary T cells fromperipheralblood blood
43 chr18:11752200-11752800 Bivalent Enhancer Fetal Brain Male brain
44 chr18:11752200-11752800 Bivalent Enhancer Fetal Heart heart
45 chr18:11752200-11753000 Flanking Bivalent TSS/Enh IMR90 fetal lung fibroblasts Cell Line lung
46 chr18:11752200-11753000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr18:11752200-11753000 Bivalent/Poised TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr18:11752200-11753000 Bivalent Enhancer Primary T helper memory cells from peripheral blood 1 blood
49 chr18:11752200-11753000 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
50 chr18:11752200-11753000 Bivalent/Poised TSS Foreskin Fibroblast Primary Cells skin02 Skin

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