Variant report

Variant	esv3343569
Chromosome Location	chr11:106166637-106170480
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-KBTBD3-4	chr11:106168094-106168238	NONHSAT023984
2	lnc-KBTBD3-4	chr11:106167080-106167504	NONHSAT023984

Extended variants
information (count: 63 )
Associated
traits (count: 100 )

Variant overlapped rSNPs/rCNVs (count:63 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs140950306	chr11:106167116-106167117	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
2	rs549134021	chr11:106167133-106167134	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
3	rs529861	chr11:106167184-106167185	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs568474354	chr11:106167218-106167219	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
5	rs185702599	chr11:106167255-106167256	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
6	rs143196269	chr11:106167256-106167257	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
7	rs147177617	chr11:106167261-106167262	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
8	rs190122425	chr11:106167275-106167276	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
9	rs182625189	chr11:106167343-106167344	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
10	rs572242705	chr11:106167344-106167345	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
11	rs12801910	chr11:106167383-106167384	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
12	rs554670364	chr11:106167384-106167385	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
13	rs1605565	chr11:106167398-106167399	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs371576246	chr11:106167433-106167434	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
15	rs546634209	chr11:106167434-106167435	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
16	rs7110227	chr11:106167462-106167463	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
17	rs577453693	chr11:106167494-106167495	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
18	rs564714131	chr11:106168110-106168111	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
19	rs532163173	chr11:106168114-106168115	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
20	rs369869831	chr11:106168115-106168116	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
21	rs75008471	chr11:106168193-106168194	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
22	rs74946975	chr11:106168195-106168196	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
23	rs75533859	chr11:106168222-106168223	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
24	rs73545581	chr11:106169610-106169611	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs576826069	chr11:106169616-106169617	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs189318884	chr11:106169630-106169631	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs181661467	chr11:106169637-106169638	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs574122767	chr11:106169649-106169650	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs369779983	chr11:106169657-106169658	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs79696646	chr11:106169667-106169668	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs148394697	chr11:106169669-106169670	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs185950026	chr11:106169673-106169674	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs531374817	chr11:106169693-106169694	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs190373733	chr11:106169724-106169725	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs142718387	chr11:106169764-106169765	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs528574696	chr11:106169830-106169831	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs537436182	chr11:106169832-106169833	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs546810335	chr11:106169846-106169847	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs601181	chr11:106169855-106169856	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs571141023	chr11:106169885-106169886	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs77226563	chr11:106169890-106169891	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs670108	chr11:106169922-106169923	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs569532607	chr11:106169925-106169926	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs539750106	chr11:106169946-106169947	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs558329064	chr11:106169969-106169970	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs11226999	chr11:106170046-106170047	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
47	rs566714384	chr11:106170051-106170052	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
48	rs534699817	chr11:106170053-106170054	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
49	rs183179193	chr11:106170097-106170098	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
50	rs574209193	chr11:106170130-106170131	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:100)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Wilms tumour	21544195	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Acute myeloid leukemia	20729466	CNVD
Cancer	21637783	CNVD
Acute myeloid leukemia	16864856	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21484798	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Glioblastoma multiforme	19960244	CNVD
Liposarcoma	21253554	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Neuroblastoma	17533364	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Glioblastoma multiforme	21080181	CNVD
Cancer	16751803	CNVD
Seminomas	18059402	CNVD
Cervical cancer	21062161	CNVD
Esophageal squamous carcinoma	18350619	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	22429812	CNVD
Breast cancer	16608533	CNVD
T-cell lymphomas	19863542	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Basal cell lymphoma	17053054	CNVD
Hepatocellular carcinoma	16785998	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21785460	CNVD
Breast cancer	21958427	CNVD
Lung cancer	18438408	CNVD
Ewing''s sarcoma	17952124	CNVD
Renal cell carcinoma	18194544	CNVD
Breast cancer	17133270	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	17603634	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Basal cell lymphoma	16790693	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Breast cancer	21364760	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Mental retardation	19966786	CNVD
Non-small cell lung cancer	21829676	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Intracranial aneurysm	16715129	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Urothelial carcinoma	21177765	CNVD
Myelofibrosis	22110671	CNVD
Ovarian cancer	21720365	CNVD
Chronic lymphocytic leukemia	17805327	CNVD
Glioblastoma multiforme	22286061	CNVD
Breast cancer	16397240	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Neuroblastoma	17327916	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Esophageal squamous carcinoma	17470683	CNVD
Mantle cell lymphoma	19029149	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Malignant melanoma	17260012	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Prostate cancer	16573809	CNVD
Obesity	19966786	CNVD
Prostate cancer	18632612	CNVD
Melanoma	17363583	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Cancer	20164919	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:106169600-106175400	ZNF genes & repeats	Dnd41	blood

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