Variant report

Variant	esv33436
Chromosome Location	chr6:28044346-28049043
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:28047868-28047922	HepG2	liver:	n/a	n/a
2	ARID3A	chr6:28048532-28048998	HepG2	liver:	n/a	n/a
3	ARID3A	chr6:28048591-28048846	K562	blood:	n/a	n/a
4	ATF1	chr6:28047726-28048133	K562	blood:	n/a	n/a
5	ATF1	chr6:28048430-28049387	K562	blood:	n/a	n/a
6	ATF2	chr6:28048350-28049566	GM12878	blood:	n/a	n/a
7	ATF2	chr6:28048448-28049556	GM12878	blood:	n/a	n/a
8	ATF2	chr6:28048346-28049134	H1-hESC	embryonic stem cell:	n/a	n/a
9	ATF2	chr6:28048438-28049095	H1-hESC	embryonic stem cell:	n/a	n/a
10	ATF3	chr6:28048412-28048960	A549	lung:	n/a	n/a
11	ATF3	chr6:28048353-28049196	H1-hESC	embryonic stem cell:	n/a	chr6:28048970-28048977 chr6:28048966-28048981 chr6:28048969-28048989 chr6:28048969-28048980 chr6:28048970-28048978 chr6:28048958-28048978 chr6:28048970-28048980 chr6:28048967-28048980 chr6:28048970-28048980 chr6:28048969-28048977 chr6:28048968-28048979 chr6:28048967-28048980
12	ATF3	chr6:28047710-28047994	K562	blood:	n/a	n/a
13	ATF3	chr6:28048411-28048982	A549	lung:	n/a	chr6:28048970-28048977 chr6:28048966-28048981 chr6:28048969-28048980 chr6:28048970-28048978 chr6:28048958-28048978 chr6:28048970-28048980 chr6:28048967-28048980 chr6:28048970-28048980 chr6:28048969-28048977 chr6:28048968-28048979 chr6:28048967-28048980
14	ATF3	chr6:28048444-28049199	K562	blood:	n/a	chr6:28048970-28048977 chr6:28048966-28048981 chr6:28048969-28048989 chr6:28048969-28048980 chr6:28048970-28048978 chr6:28048958-28048978 chr6:28048970-28048980 chr6:28048967-28048980 chr6:28048970-28048980 chr6:28048969-28048977 chr6:28048968-28048979 chr6:28048967-28048980
15	BACH1	chr6:28048638-28048760	K562	blood:	n/a	n/a
16	BACH1	chr6:28047696-28048060	H1-hESC	embryonic stem cell:	n/a	n/a
17	BATF	chr6:28048542-28048922	GM12878	blood:	n/a	n/a
18	BATF	chr6:28048558-28048840	GM12878	blood:	n/a	n/a
19	BATF	chr6:28047723-28047951	GM12878	blood:	n/a	n/a
20	BCL11A	chr6:28048578-28048829	GM12878	blood:	n/a	chr6:28048711-28048720
21	BCL11A	chr6:28048566-28048898	GM12878	blood:	n/a	chr6:28048711-28048720
22	BCL3	chr6:28048346-28049045	A549	lung:	n/a	chr6:28048957-28048966 chr6:28048711-28048720
23	BCL3	chr6:28048482-28048948	A549	lung:	n/a	chr6:28048711-28048720
24	BCLAF1	chr6:28048441-28049028	GM12878	blood:	n/a	chr6:28048957-28048966 chr6:28048711-28048720
25	BCLAF1	chr6:28048426-28049109	K562	blood:	n/a	chr6:28048957-28048966 chr6:28048711-28048720
26	BCLAF1	chr6:28048425-28049532	GM12878	blood:	n/a	chr6:28049372-28049381 chr6:28048957-28048966 chr6:28048711-28048720
27	BCLAF1	chr6:28048350-28049009	K562	blood:	n/a	chr6:28048957-28048966 chr6:28048711-28048720
28	BHLHE40	chr6:28048507-28049114	K562	blood:	n/a	chr6:28048957-28048973
29	BHLHE40	chr6:28047727-28047994	GM12878	blood:	n/a	n/a
30	BHLHE40	chr6:28047694-28048037	K562	blood:	n/a	n/a
31	BHLHE40	chr6:28048453-28049661	GM12878	blood:	n/a	chr6:28048957-28048973
32	BRCA1	chr6:28048580-28049534	GM12878	blood:	n/a	n/a
33	BRCA1	chr6:28048514-28049222	Hela-S3	cervix:	n/a	n/a
34	BRCA1	chr6:28048568-28049354	HepG2	liver:	n/a	n/a
35	CBX3	chr6:28048377-28049161	K562	blood:	n/a	n/a
36	CBX3	chr6:28047582-28049486	K562	blood:	n/a	n/a
37	CBX3	chr6:28048342-28049353	HCT-116	colon:	n/a	n/a
38	CCNT2	chr6:28047765-28047968	K562	blood:	n/a	n/a
39	CCNT2	chr6:28048598-28049133	K562	blood:	n/a	chr6:28049005-28049014
40	CEBPB	chr6:28048388-28049119	K562	blood:	n/a	n/a
41	CEBPB	chr6:28048441-28049655	GM12878	blood:	n/a	n/a
42	CEBPB	chr6:28046730-28046904	K562	blood:	n/a	chr6:28046793-28046804
43	CEBPB	chr6:28048521-28049053	HepG2	liver:	n/a	n/a
44	CEBPB	chr6:28048789-28049089	K562	blood:	n/a	n/a
45	CEBPB	chr6:28047804-28047916	HepG2	liver:	n/a	n/a
46	CEBPB	chr6:28048615-28048842	HepG2	liver:	n/a	n/a
47	CEBPB	chr6:28048473-28049127	Hela-S3	cervix:	n/a	n/a
48	CEBPB	chr6:28046640-28046965	HepG2	liver:	n/a	chr6:28046793-28046804
49	CEBPB	chr6:28046699-28046870	A549	lung:	n/a	chr6:28046793-28046804
50	CEBPD	chr6:28048441-28048908	HepG2	liver:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:28046448-28046498	RPTEC	kidney:	n/a
2	chr6:28046730-28046780	NB4	blood:	n/a
3	chr6:28048973-28049023	MCF-7	breast:	n/a
4	chr6:28046730-28046780	NHBE	bronchial:	n/a
5	chr6:28048961-28049011	PFSK-1	brain:	n/a
6	chr6:28046317-28046367	K562	blood:	n/a
7	chr6:28048756-28048806	K562	blood:	n/a
8	chr6:28045615-28045665	AoSMC	blood vessel:	n/a
9	chr6:28048756-28048806	HCM	heart:	n/a
10	chr6:28046317-28046367	GM12878	blood:	n/a
11	chr6:28048723-28048773	HAEpiC	amniotic membrane:	n/a
12	chr6:28048874-28048924	NB4	blood:	n/a
13	chr6:28048961-28049011	NT2-D1	testis:	n/a
14	chr6:28048874-28048924	MCF-7	breast:	n/a
15	chr6:28045602-28045652	HEEpiC	esophagus:	n/a
16	chr6:28046730-28046780	IMR90	lung:	fetal
17	chr6:28048723-28048773	K562	blood:	n/a
18	chr6:28046317-28046367	U87	brain:	n/a
19	chr6:28045602-28045652	HL-60	blood:	n/a
20	chr6:28048756-28048806	PANC-1	pancreas:	n/a
21	chr6:28046730-28046780	HAEpiC	amniotic membrane:	n/a
22	chr6:28048958-28049008	SK-N-MC	brain:	n/a
23	chr6:28045615-28045665	HEEpiC	esophagus:	n/a
24	chr6:28048973-28049023	SK-N-SH	brain:	n/a
25	chr6:28048723-28048773	H1-hESC	embryonic stem cell:	embryo
26	chr6:28048958-28049008	Caco-2	colon:	n/a
27	chr6:28046448-28046498	AoSMC	blood vessel:	n/a
28	chr6:28046730-28046780	AG09309	skin:	n/a
29	chr6:28048958-28049008	HPAEpiC	pulmonary alveolar:	n/a
30	chr6:28048874-28048924	AG04449	skin:	fetal
31	chr6:28046317-28046367	GM19239	blood:	n/a
32	chr6:28048961-28049011	LNCaP	prostate:	n/a
33	chr6:28048874-28048924	HCM	heart:	n/a
34	chr6:28046730-28046780	HRE	kidney:	n/a
35	chr6:28048723-28048773	GM06990	blood:	n/a
36	chr6:28045615-28045665	NT2-D1	testis:	n/a
37	chr6:28045615-28045665	MCF-7	breast:	n/a
38	chr6:28048723-28048773	CMK	blood:	n/a
39	chr6:28048723-28048773	HCM	heart:	n/a
40	chr6:28048961-28049011	HEEpiC	esophagus:	n/a
41	chr6:28046317-28046367	NB4	blood:	n/a
42	chr6:28048961-28049011	SKMC	muscle:	n/a
43	chr6:28048874-28048924	NH-A	brain:	n/a
44	chr6:28048958-28049008	HRE	kidney:	n/a
45	chr6:28046448-28046498	AG09319	gingival:	n/a
46	chr6:28046317-28046367	SK-N-SH_RA	brain:	n/a
47	chr6:28048723-28048773	SKMC	muscle:	n/a
48	chr6:28045602-28045652	GM12891	blood:	n/a
49	chr6:28048756-28048806	SK-N-SH_RA	brain:	n/a
50	chr6:28048973-28049023	HL-60	blood:	n/a

No.	Distal block	Cell Line	Cell type
1	chr6:27803974..27806831-chr6:28047434..28050953,3	K562	blood:
2	chr6:27805460..27807795-chr6:28047138..28049507,2	MCF-7	breast:
3	chr6:28046886..28048721-chr6:28303106..28304865,2	K562	blood:
4	chr13:39260551..39262193-chr6:28047138..28049723,2	MCF-7	breast:
5	chr6:28049008..28053394-chr6:28054919..28058473,6	MCF-7	breast:
6	chr6:28046111..28048022-chr6:28095723..28098620,2	K562	blood:
7	chr6:27859779..27863183-chr6:28046529..28048591,3	MCF-7	breast:
8	chr6:28044713..28049958-chr6:28107484..28111355,5	K562	blood:
9	chr6:28044681..28046793-chr6:28367579..28369114,2	K562	blood:
10	chr6:28046527..28048657-chr6:28057860..28059913,2	MCF-7	breast:
11	chr17:34900540..34901507-chr6:28048951..28049742,2	NB4	blood:
12	chr6:28040138..28042745-chr6:28048469..28050463,2	K562	blood:
13	chr6:28046681..28048670-chr6:28358880..28361224,2	K562	blood:
14	chr6:27115027..27116000-chr6:28048354..28049079,2	Hela-S3	cervix:
15	chr6:28048448..28050071-chr6:28234359..28236283,2	K562	blood:
16	chr6:28043259..28045673-chr6:28049244..28050877,2	K562	blood:
17	chr6:28047155..28050172-chr6:28104375..28106249,3	K562	blood:
18	chr6:28045344..28046935-chr6:28047195..28048919,2	K562	blood:
19	chr6:27864591..27866445-chr6:28044322..28046847,2	K562	blood:
20	chr6:27858986..27862091-chr6:28047541..28050017,3	K562	blood:
21	chr6:27858116..27862502-chr6:28047404..28050448,4	K562	blood:
22	chr6:28042824..28044940-chr6:28104106..28105733,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZKSCAN4-4	chr6:28046573-28046750	NONHSAT108424
2	lnc-ZKSCAN4-4	chr6:28048404-28048908	ENSG00000272009.1
3	lnc-ZKSCAN4-4	chr6:28046570-28046750	ENSG00000272009.1
4	lnc-ZKSCAN4-4	chr6:28048404-28048908	NONHSAT108424

Variant related genes	Relation type
ZNF165	TF binding region
ENSG00000272009	TF binding region
ZNF165	CpG island
ENSG00000272009	CpG island
ENSG00000196331	chromatin interactions
ENSG00000261839	chromatin interactions
ENSG00000197279	chromatin interactions
ENSG00000184348	chromatin interactions
ENSG00000233224	chromatin interactions
ENSG00000005955	chromatin interactions
ENSG00000269293	chromatin interactions
ENSG00000238610	chromatin interactions
ENSG00000272009	chromatin interactions
ENSG00000235109	chromatin interactions
ENSG00000197153	chromatin interactions
ENSG00000265565	chromatin interactions
ENSG00000220721	chromatin interactions
ENSG00000219891	chromatin interactions
ENSG00000150893	chromatin interactions
ENSG00000198315	chromatin interactions
ENSG00000197062	chromatin interactions
ENSG00000233822	chromatin interactions

Extended variants
information (count: 146 )
Associated
traits (count: 102 )

Variant overlapped rSNPs/rCNVs (count:146 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs188396368	chr6:28044364-28044365	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
2	rs537504723	chr6:28044373-28044374	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
3	rs557171644	chr6:28044389-28044390	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
4	rs147879267	chr6:28044425-28044426	Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
5	rs542798923	chr6:28044431-28044432	Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
6	rs141512222	chr6:28044447-28044448	Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
7	rs573173585	chr6:28044459-28044460	Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
8	rs56310871	chr6:28044482-28044483	Weak transcription	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
9	rs558117187	chr6:28044492-28044493	Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
10	rs564860304	chr6:28044493-28044494	Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
11	rs191647882	chr6:28044521-28044522	Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
12	rs544342701	chr6:28044654-28044655	Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
13	rs560803450	chr6:28044664-28044665	Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
14	rs111299082	chr6:28044733-28044734	Weak transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
15	rs6913038	chr6:28044756-28044757	Weak transcription	Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs112854252	chr6:28044795-28044796	Weak transcription	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
17	rs566785317	chr6:28044825-28044826	Weak transcription	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
18	rs532407649	chr6:28044843-28044844	Weak transcription	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
19	rs551486655	chr6:28045010-28045011	Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
20	rs184320739	chr6:28045052-28045053	Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
21	rs537039971	chr6:28045071-28045072	Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
22	rs147016639	chr6:28045076-28045077	Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
23	rs564089733	chr6:28045093-28045094	Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
24	rs188280510	chr6:28045231-28045232	Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
25	rs528409129	chr6:28045245-28045246	Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
26	rs553117046	chr6:28045264-28045265	Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
27	rs111910871	chr6:28045317-28045318	Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
28	rs573212874	chr6:28045347-28045348	Weak transcription	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
29	rs546530394	chr6:28045362-28045363	Weak transcription	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
30	rs539276602	chr6:28045365-28045366	Weak transcription	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
31	rs568055888	chr6:28045428-28045429	Weak transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
32	rs57349346	chr6:28045449-28045450	Weak transcription	Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs376738045	chr6:28045475-28045476	Weak transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
34	rs180975739	chr6:28045602-28045603	Weak transcription Enhancers	TF binding region CpG island Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
35	rs543839679	chr6:28045625-28045626	Weak transcription Enhancers	TF binding region CpG island Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
36	rs542332840	chr6:28045634-28045635	Weak transcription Enhancers	TF binding region CpG island Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
37	rs560985458	chr6:28045691-28045692	Weak transcription Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
38	rs574548362	chr6:28045734-28045735	Weak transcription Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
39	rs540434589	chr6:28045751-28045752	Weak transcription Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
40	rs560341816	chr6:28045865-28045866	Weak transcription Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
41	rs138076438	chr6:28045900-28045901	Weak transcription Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
42	rs3956922	chr6:28046016-28046017	Weak transcription Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
43	rs79858154	chr6:28046051-28046052	Weak transcription Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
44	rs530964332	chr6:28046060-28046061	Weak transcription Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
45	rs149519873	chr6:28046068-28046069	Weak transcription Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
46	rs185496977	chr6:28046134-28046135	Weak transcription Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
47	rs34716816	chr6:28046169-28046170	Weak transcription Enhancers	TF binding region Chromatin interactive region	5 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
48	rs546796385	chr6:28046175-28046176	Weak transcription Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
49	rs75481861	chr6:28046259-28046260	Weak transcription Enhancers	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
50	rs538849196	chr6:28046317-28046318	Weak transcription Enhancers	CpG island Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:102)

Disease	PMID	Source
Acute lymphoblastic leukemia	22237106	CNVD
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
Lung cancer	18438408	CNVD
Ewing''s sarcoma	17952124	CNVD
Gastric cancer	16891809	CNVD
Ovarian cancer	21781307	CNVD
Autism	21448237	CNVD
Cancer	20164919	CNVD
Melanoma	18172304	CNVD
Breast cancer	22844521	CNVD
HIV/AIDS	22844521	CNVD
Ovarian cancer	22844521	CNVD
Prostate cancer	22844521	CNVD
Psoriasis	22844521	CNVD
Rheumatoid arthritis	22844521	CNVD
Sclerosis systemic	22844521	CNVD
Systemic lupus erythematosus	22844521	CNVD
Breast cancer	22522925	CNVD
Breast cancer	21552322	CNVD
Immune disease	21076436	CNVD
Autoimmune disease	19135723	CNVD
Systemic lupus erythematosus	17953491	CNVD
Recurrent Infections	22737222	CNVD
Systemic lupus erythematosus	21904924	CNVD
Ependymoma	19289631	CNVD
Gestational infection	22844521	CNVD
Head circumference	22844521	CNVD
Infertility	22844521	CNVD
Recurrent birth weight diabetes	22844521	CNVD
Obesity	22844521	CNVD
Recurrent pregnancy loss	22844521	CNVD
Intellectual disability	21811512	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Congenital anomalies of the kidney and urinary tract	18694510	CNVD
Nasopharyngeal cancer	22815911	CNVD
Hepatocellular carcinoma	16750200	CNVD
Basal cell lymphoma	21115979	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	17133270	CNVD
Autism	22495311	CNVD
Cancer	16790693	CNVD
Breast cancer	22032731	CNVD
Cervical cancer	21062161	CNVD
Breast cancer	21785460	CNVD
Retinoblastoma	16790693	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Systemic lupus erythematosus	17503323	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
T-cell lymphomas	19863542	CNVD
Urothelial carcinoma	18382360	CNVD
Cancer	21183584	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
Renal cell carcinoma	18765545	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Gastric cancer	17908304	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16397240	CNVD
Metanephric adenoma	20802469	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	21364760	CNVD
Schizophrenia	19571809	CNVD
Schizophrenia	19571808	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Neuroblastoma	16790693	CNVD
Bipolar disorder	19114987	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD

Chromatin state (count:268 , 50 per page) page: 1 2 3 4 5 6

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:28042600-28046600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr6:28043200-28047800	Weak transcription	Spleen	Spleen
3	chr6:28044200-28044400	Enhancers	K562	blood
4	chr6:28044400-28046200	Weak transcription	K562	blood
5	chr6:28045200-28047600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr6:28045600-28046000	Enhancers	Fetal Heart	heart
7	chr6:28045600-28046400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
8	chr6:28045600-28047800	Weak transcription	Right Atrium	heart
9	chr6:28045800-28047800	Weak transcription	Fetal Brain Male	brain
10	chr6:28046000-28047800	Weak transcription	Fetal Heart	heart
11	chr6:28046200-28047000	Enhancers	GM12878-XiMat	blood
12	chr6:28046200-28047400	Enhancers	K562	blood
13	chr6:28046400-28047600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
14	chr6:28046600-28046800	Enhancers	Left Ventricle	heart
15	chr6:28046600-28046800	Enhancers	Skeletal Muscle Female	skeletal muscle
16	chr6:28046600-28047400	Enhancers	Breast Myoepithelial Primary Cells	Breast
17	chr6:28046800-28047000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
18	chr6:28046800-28047000	Enhancers	Lung	lung
19	chr6:28046800-28047600	Enhancers	Primary B cells from peripheral blood	blood
20	chr6:28046800-28047600	Enhancers	Placenta	Placenta
21	chr6:28046800-28047800	Weak transcription	Left Ventricle	heart
22	chr6:28047000-28047200	Enhancers	Primary T helper cells PMA-I stimulated	--
23	chr6:28047000-28047200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
24	chr6:28047000-28047200	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
25	chr6:28047000-28047600	Flanking Active TSS	GM12878-XiMat	blood
26	chr6:28047000-28047600	Enhancers	HepG2	liver
27	chr6:28047000-28047800	Enhancers	Cortex derived primary cultured neurospheres	brain
28	chr6:28047000-28047800	Weak transcription	Lung	lung
29	chr6:28047000-28048400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
30	chr6:28047200-28047400	Enhancers	Primary hematopoietic stem cells	blood
31	chr6:28047200-28047400	Enhancers	Primary hematopoietic stem cells short term culture	blood
32	chr6:28047200-28047400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
33	chr6:28047200-28047400	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
34	chr6:28047200-28047600	Enhancers	Primary B cells from cord blood	blood
35	chr6:28047200-28047600	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
36	chr6:28047200-28047600	Enhancers	Liver	Liver
37	chr6:28047200-28047600	Enhancers	Pancreatic Islets	Pancreatic Islet
38	chr6:28047200-28047600	Enhancers	Rectal Mucosa Donor 31	rectum
39	chr6:28047200-28047800	Active TSS	Fetal Brain Female	brain
40	chr6:28047200-28049000	Active TSS	Monocytes-CD14+_RO01746	blood
41	chr6:28047200-28049200	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
42	chr6:28047200-28049400	Active TSS	Hela-S3	cervix
43	chr6:28047400-28047600	Active TSS	Primary neutrophils fromperipheralblood	blood
44	chr6:28047400-28047600	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
45	chr6:28047400-28047600	Enhancers	Brain Hippocampus Middle	brain
46	chr6:28047400-28047600	Enhancers	Dnd41	blood
47	chr6:28047400-28047800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
48	chr6:28047400-28048200	Active TSS	Primary hematopoietic stem cells	blood
49	chr6:28047400-28049200	Active TSS	Primary hematopoietic stem cells short term culture	blood
50	chr6:28047400-28049200	Active TSS	Colonic Mucosa	Colon

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