Variant report

Variant	esv3374130
Chromosome Location	chr15:93197573-93200121
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:288)
CpG islands
(count:671)
Chromatin interactive
region (count:9)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:288 , 50 per page) page: 1 2 3 4 5 6

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF2	chr15:93197126-93197783	GM12878	blood:	n/a	n/a
2	BACH1	chr15:93198450-93199162	H1-hESC	embryonic stem cell:	n/a	n/a
3	BCLAF1	chr15:93198674-93199269	GM12878	blood:	n/a	chr15:93198980-93198989 chr15:93199128-93199141 chr15:93199042-93199051
4	BHLHE40	chr15:93198375-93198455	GM12878	blood:	n/a	n/a
5	BHLHE40	chr15:93198892-93199292	GM12878	blood:	n/a	chr15:93198982-93198998
6	BHLHE40	chr15:93197434-93197672	GM12878	blood:	n/a	n/a
7	CCNT2	chr15:93198981-93199109	K562	blood:	n/a	n/a
8	CHD1	chr15:93198797-93199020	H1-hESC	embryonic stem cell:	n/a	n/a
9	CHD2	chr15:93198930-93199387	GM12878	blood:	n/a	chr15:93199140-93199150
10	CHD2	chr15:93198481-93198611	H1-hESC	embryonic stem cell:	n/a	n/a
11	CHD2	chr15:93198915-93199146	H1-hESC	embryonic stem cell:	n/a	n/a
12	CHD2	chr15:93198425-93198625	GM12878	blood:	n/a	n/a
13	CREB1	chr15:93198598-93199248	A549	lung:	n/a	n/a
14	CTCF	chr15:93198432-93198516	GM10266	blood:	n/a	chr15:93198483-93198491
15	CTCF	chr15:93197465-93197650	LNCaP	prostate:	n/a	n/a
16	CTCF	chr15:93197480-93197630	AG04449	skin:	n/a	n/a
17	CTCF	chr15:93198420-93198570	MCF-7	breast:	n/a	chr15:93198483-93198491
18	CTCF	chr15:93197459-93197665	MCF-7	breast:	n/a	n/a
19	CTCF	chr15:93197459-93197662	HUVEC	blood vessel:	n/a	n/a
20	CTCF	chr15:93197518-93197606	A549	lung:	n/a	n/a
21	CTCF	chr15:93197484-93197623	GM10266	blood:	n/a	n/a
22	CTCF	chr15:93198415-93198607	H1-hESC	embryonic stem cell:	n/a	chr15:93198483-93198491
23	CTCF	chr15:93197453-93197667	MCF-7	breast:	n/a	n/a
24	CTCF	chr15:93197509-93197637	GM12878	blood:	n/a	n/a
25	CTCF	chr15:93197480-93197630	HRE	kidney:	n/a	n/a
26	CTCF	chr15:93198420-93198570	GM12867	blood:	n/a	chr15:93198483-93198491
27	CTCF	chr15:93198440-93198590	GM12866	blood:	n/a	chr15:93198483-93198491
28	CTCF	chr15:93198376-93198648	MCF-7	breast:	n/a	chr15:93198483-93198491
29	CTCF	chr15:93197442-93197680	MCF-7	breast:	n/a	n/a
30	CTCF	chr15:93198396-93198600	GM12891	blood:	n/a	chr15:93198483-93198491
31	CTCF	chr15:93197524-93197614	GM13977	blood:	n/a	n/a
32	CTCF	chr15:93198320-93198470	GM12869	blood:	n/a	n/a
33	CTCF	chr15:93197520-93197670	GM12875	blood:	n/a	n/a
34	CTCF	chr15:93197520-93197670	Caco-2	colon:	n/a	n/a
35	CTCF	chr15:93198371-93198688	GM12878	blood:	n/a	chr15:93198483-93198491
36	CTCF	chr15:93197540-93197690	RPTEC	kidney:	n/a	n/a
37	CTCF	chr15:93197529-93197601	GM19240	blood:	n/a	n/a
38	CTCF	chr15:93197369-93197752	GM12878	blood:	n/a	n/a
39	CTCF	chr15:93198427-93198582	MCF-7	breast:	n/a	chr15:93198483-93198491
40	CTCF	chr15:93197460-93197610	Caco-2	colon:	n/a	n/a
41	CTCF	chr15:93198380-93198530	SAEC	small airway:	n/a	chr15:93198483-93198491
42	CTCF	chr15:93198440-93198590	GM12870	blood:	n/a	chr15:93198483-93198491
43	CTCF	chr15:93198440-93198590	GM12875	blood:	n/a	chr15:93198483-93198491
44	CTCF	chr15:93197540-93197690	GM12878	blood:	n/a	n/a
45	CTCF	chr15:93197480-93197630	GM12874	blood:	n/a	n/a
46	CTCF	chr15:93198440-93198590	GM12865	blood:	n/a	chr15:93198483-93198491
47	CTCF	chr15:93197462-93197622	HepG2	liver:	n/a	n/a
48	CTCF	chr15:93197524-93197621	HepG2	liver:	n/a	n/a
49	CTCF	chr15:93198485-93198527	Pancreas_OC	pancreas:	n/a	n/a
50	CTCF	chr15:93197440-93197590	GM12873	blood:	n/a	n/a

(count:671 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:93199018-93199068	K562	blood:	n/a
2	chr15:93198700-93198750	MCF-7	breast:	n/a
3	chr15:93199018-93199068	HIPEpiC	eye:	n/a
4	chr15:93199519-93199569	HEK293	kidney:	embryo
5	chr15:93198495-93198545	HIPEpiC	eye:	n/a
6	chr15:93199536-93199586	MCF10A-Er-Src	breast:	n/a
7	chr15:93199180-93199230	GM19239	blood:	n/a
8	chr15:93199049-93199099	NHDF-neo	bronchial:	n/a
9	chr15:93198700-93198750	HRE	kidney:	n/a
10	chr15:93199130-93199180	BE2_C	brain:	n/a
11	chr15:93198700-93198750	HCT-116	colon:	n/a
12	chr15:93199130-93199180	HUVEC	blood vessel:	n/a
13	chr15:93198495-93198545	HCT-116	colon:	n/a
14	chr15:93199458-93199508	U87	brain:	n/a
15	chr15:93199049-93199099	HCT-116	colon:	n/a
16	chr15:93199049-93199099	HRCEpiC	kidney:	n/a
17	chr15:93198700-93198750	BE2_C	brain:	n/a
18	chr15:93199141-93199191	HRE	kidney:	n/a
19	chr15:93199141-93199191	K562	blood:	n/a
20	chr15:93199130-93199180	Caco-2	colon:	n/a
21	chr15:93199018-93199068	HCPEpiC	choroid plexus:	n/a
22	chr15:93198495-93198545	HCF	heart:	n/a
23	chr15:93199180-93199230	NH-A	brain:	n/a
24	chr15:93199037-93199087	HRE	kidney:	n/a
25	chr15:93199458-93199508	T-47D	breast:	n/a
26	chr15:93199180-93199230	PANC-1	pancreas:	n/a
27	chr15:93198495-93198545	HRE	kidney:	n/a
28	chr15:93198700-93198750	NHBE	bronchial:	n/a
29	chr15:93199458-93199508	LNCaP	prostate:	n/a
30	chr15:93199037-93199087	Caco-2	colon:	n/a
31	chr15:93199141-93199191	HNPCEpiC	eye:	n/a
32	chr15:93199141-93199191	SAEC	small airway:	n/a
33	chr15:93199018-93199068	AG09309	skin:	n/a
34	chr15:93199130-93199180	HCPEpiC	choroid plexus:	n/a
35	chr15:93198700-93198750	AG09309	skin:	n/a
36	chr15:93199519-93199569	H1-hESC	embryonic stem cell:	embryo
37	chr15:93199130-93199180	IMR90	lung:	fetal
38	chr15:93199536-93199586	HRPEpiC	eye:	n/a
39	chr15:93199049-93199099	AG09309	skin:	n/a
40	chr15:93199037-93199087	MCF-7	breast:	n/a
41	chr15:93199458-93199508	AG10803	skin:	n/a
42	chr15:93199536-93199586	LNCaP	prostate:	n/a
43	chr15:93199519-93199569	NB4	blood:	n/a
44	chr15:93199519-93199569	HCT-116	colon:	n/a
45	chr15:93199536-93199586	AG09309	skin:	n/a
46	chr15:93199018-93199068	A549	lung:	n/a
47	chr15:93199141-93199191	Jurkat	blood:	n/a
48	chr15:93199037-93199087	SKMC	muscle:	n/a
49	chr15:93199519-93199569	U87	brain:	n/a
50	chr15:93198700-93198750	AG04450	lung:	fetal

(count:9 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr15:93187167..93190385-chr15:93197959..93201879,3	K562	blood:
2	chr15:93197891..93200562-chr3:14219402..14221003,2	MCF-7	breast:
3	chr15:93145840..93149737-chr15:93196292..93199149,3	MCF-7	breast:
4	chr15:93197096..93198076-chr15:93225951..93227103,4	MCF-7	breast:
5	chr15:93197470..93197983-chr15:93226402..93227309,2	MCF-7	breast:
6	chr15:93196488..93198404-chr17:67442282..67443797,2	MCF-7	breast:
7	chr15:93188112..93190385-chr15:93199041..93201879,2	K562	blood:
8	chr15:93197537..93199243-chr15:93427702..93429402,2	MCF-7	breast:
9	chr15:93199083..93200722-chr17:17739000..17741179,2	MCF-7	breast:

No data

Variant related genes	Relation type
FAM174B	TF binding region
FAM174B	CpG island
ENSG00000185442	chromatin interactions
ENSG00000072310	chromatin interactions
ENSG00000271763	chromatin interactions
ENSG00000170860	chromatin interactions
ENSG00000154767	chromatin interactions
ENSG00000272888	chromatin interactions

Extended variants
information (count: 122 )
Associated
traits (count: 61 )

Variant overlapped rSNPs/rCNVs (count:122 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs569553907	chr15:93197582-93197583	Flanking Active TSS Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
2	rs556649226	chr15:93197629-93197630	Active TSS Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
3	rs140832276	chr15:93197676-93197677	Active TSS Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
4	rs533152736	chr15:93197685-93197686	Active TSS Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
5	rs550472566	chr15:93197715-93197716	Active TSS Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
6	rs570220344	chr15:93197721-93197722	Active TSS Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
7	rs435171	chr15:93197797-93197798	Active TSS Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
8	rs549211879	chr15:93197850-93197851	Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
9	rs192672671	chr15:93197866-93197867	Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
10	rs184473033	chr15:93197883-93197884	Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
11	rs150153044	chr15:93197949-93197950	Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
12	rs138754210	chr15:93197951-93197952	Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
13	rs576449495	chr15:93197955-93197956	Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
14	rs539026726	chr15:93197960-93197961	Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
15	rs556429766	chr15:93197961-93197962	Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
16	rs576208308	chr15:93197993-93197994	Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
17	rs542106928	chr15:93198001-93198002	Active TSS Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
18	rs5814547	chr15:93198017-93198018	Active TSS Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
19	rs79060105	chr15:93198018-93198019	Active TSS Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
20	rs574172811	chr15:93198029-93198030	Active TSS Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
21	rs532698486	chr15:93198030-93198031	Active TSS Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
22	rs397722679	chr15:93198031-93198032	Active TSS Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
23	rs528819022	chr15:93198032-93198033	Active TSS Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
24	rs188543334	chr15:93198124-93198125	Active TSS Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
25	rs572257898	chr15:93198127-93198128	Active TSS Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
26	rs541569346	chr15:93198204-93198205	Active TSS Bivalent/Poised TSS Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
27	rs564545380	chr15:93198237-93198238	Active TSS Bivalent/Poised TSS Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
28	rs140440508	chr15:93198277-93198278	Active TSS Bivalent/Poised TSS Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
29	rs1496712	chr15:93198296-93198297	Active TSS Bivalent/Poised TSS Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
30	rs145627227	chr15:93198297-93198298	Active TSS Bivalent/Poised TSS Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
31	rs77999600	chr15:93198319-93198320	Active TSS Bivalent/Poised TSS Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
32	rs549249047	chr15:93198336-93198337	Active TSS Bivalent/Poised TSS Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
33	rs528418881	chr15:93198361-93198362	Active TSS Bivalent/Poised TSS Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
34	rs138235581	chr15:93198388-93198389	Active TSS Bivalent/Poised TSS Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
35	rs528630729	chr15:93198410-93198411	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
36	rs547102260	chr15:93198456-93198457	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
37	rs570409026	chr15:93198468-93198469	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
38	rs539420103	chr15:93198470-93198471	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
39	rs555935163	chr15:93198478-93198479	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
40	rs200954392	chr15:93198507-93198508	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
41	rs503112	chr15:93198513-93198514	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription	TF binding region CpG island Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
42	rs555681253	chr15:93198519-93198520	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
43	rs375712759	chr15:93198522-93198523	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
44	rs367642570	chr15:93198528-93198529	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
45	rs371711774	chr15:93198533-93198534	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
46	rs114877871	chr15:93198534-93198535	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription	TF binding region CpG island Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
47	rs77720151	chr15:93198562-93198563	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
48	rs371887853	chr15:93198572-93198573	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
49	rs369743222	chr15:93198580-93198581	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
50	rs371564462	chr15:93198582-93198583	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:61)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Wilms tumour	21544195	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Melanoma	18172304	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Cancer	16751803	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Lung cancer	18438408	CNVD
Acute myeloid leukemia	16864856	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
small cell lung cancer	20016488	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Embryonal rhabdomyosarcoma	16790082	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Sudden cardiac death	19188705	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17133270	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Epilepsy	19486360	CNVD
Acute myeloid leukemia	17237825	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Ovarian cancer	21720365	CNVD
Developmental delay	21147756	CNVD
Hepatocellular carcinoma	16750200	CNVD
Central neurocytomas	17123091	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Myelofibrosis	22110671	CNVD
Burkitt''s lymphoma	19759907	CNVD
Breast cancer	21364760	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:406 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:93182000-93197800	Weak transcription	Small Intestine	intestine
2	chr15:93183200-93198400	Weak transcription	Sigmoid Colon	Sigmoid Colon
3	chr15:93193800-93199000	Enhancers	Fetal Heart	heart
4	chr15:93194200-93198200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
5	chr15:93194400-93198400	Weak transcription	Brain Anterior Caudate	brain
6	chr15:93194600-93197600	Weak transcription	Fetal Brain Female	brain
7	chr15:93194600-93198400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr15:93195000-93197600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
9	chr15:93195200-93199600	Active TSS	Pancreatic Islets	Pancreatic Islet
10	chr15:93195400-93197600	Flanking Active TSS	Pancreas	Pancrea
11	chr15:93195400-93197600	Enhancers	Right Ventricle	heart
12	chr15:93195600-93197600	Enhancers	Fetal Intestine Large	intestine
13	chr15:93195600-93197600	Genic enhancers	Fetal Muscle Leg	muscle
14	chr15:93195600-93198000	Enhancers	Right Atrium	heart
15	chr15:93195800-93197600	Enhancers	Brain Angular Gyrus	brain
16	chr15:93195800-93198400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr15:93196200-93198000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
18	chr15:93196200-93198200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
19	chr15:93196600-93197600	Genic enhancers	Fetal Muscle Trunk	muscle
20	chr15:93196600-93199200	Enhancers	Fetal Brain Male	brain
21	chr15:93196800-93197600	Enhancers	Duodenum Smooth Muscle	Duodenum
22	chr15:93196800-93197800	Enhancers	H1 Cell Line	embryonic stem cell
23	chr15:93196800-93197800	Enhancers	Left Ventricle	heart
24	chr15:93196800-93197800	Enhancers	Lung	lung
25	chr15:93196800-93198000	Enhancers	Colon Smooth Muscle	Colon
26	chr15:93196800-93198000	Enhancers	Skeletal Muscle Male	skeletal muscle
27	chr15:93196800-93198200	Flanking Active TSS	Stomach Smooth Muscle	stomach
28	chr15:93196800-93198400	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
29	chr15:93197000-93197600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
30	chr15:93197000-93197600	Enhancers	Brain Hippocampus Middle	brain
31	chr15:93197000-93197800	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
32	chr15:93197000-93197800	Enhancers	Ovary	ovary
33	chr15:93197000-93197800	Flanking Active TSS	Stomach Mucosa	stomach
34	chr15:93197000-93198000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
35	chr15:93197000-93198000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
36	chr15:93197000-93198200	Enhancers	Fetal Thymus	thymus
37	chr15:93197000-93198400	Enhancers	Esophagus	oesophagus
38	chr15:93197000-93199600	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
39	chr15:93197200-93197600	Flanking Active TSS	ES-I3 Cell Line	embryonic stem cell
40	chr15:93197200-93197600	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
41	chr15:93197200-93197600	Flanking Active TSS	Gastric	stomach
42	chr15:93197200-93197600	Flanking Active TSS	HSMM	muscle
43	chr15:93197200-93197800	Enhancers	Fetal Intestine Small	intestine
44	chr15:93197200-93197800	Flanking Active TSS	Fetal Kidney	kidney
45	chr15:93197200-93197800	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
46	chr15:93197200-93198000	Enhancers	H9 Cell Line	embryonic stem cell
47	chr15:93197200-93198000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
48	chr15:93197200-93198000	Enhancers	Colonic Mucosa	Colon
49	chr15:93197200-93198200	Flanking Active TSS	HUVEC	blood vessel
50	chr15:93197200-93198400	Enhancers	Brain Substantia Nigra	brain

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