Variant report

Variant	esv3396941
Chromosome Location	chr10:96921262-96925460
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 87 )
Associated
traits (count: 69 )

Variant overlapped rSNPs/rCNVs (count:87 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs35027271	chr10:96921262-96921263	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs149816898	chr10:96921335-96921336	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs572129774	chr10:96921365-96921366	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs112886334	chr10:96921377-96921378	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs561021108	chr10:96921411-96921412	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs117025999	chr10:96921420-96921421	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs543401842	chr10:96921486-96921487	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs375504636	chr10:96921501-96921502	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs34823003	chr10:96921502-96921503	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs36174932	chr10:96921504-96921505	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs149003817	chr10:96921505-96921506	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs71559548	chr10:96921523-96921524	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs35401686	chr10:96921537-96921538	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs59329992	chr10:96921550-96921551	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs372652007	chr10:96921553-96921554	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs36199430	chr10:96921560-96921561	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs79094013	chr10:96921611-96921612	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs78076048	chr10:96921650-96921651	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs527878776	chr10:96921653-96921654	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs548111149	chr10:96921661-96921662	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs62318563	chr10:96921685-96921686	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs71566771	chr10:96921686-96921687	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs74395305	chr10:96921699-96921700	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs76120062	chr10:96921701-96921702	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs76269879	chr10:96921703-96921704	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs376036073	chr10:96921707-96921708	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs77492483	chr10:96921708-96921709	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs76938081	chr10:96921714-96921715	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs74341599	chr10:96921718-96921719	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs71501044	chr10:96921719-96921720	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs9683286	chr10:96921727-96921728	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs184118888	chr10:96921794-96921795	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs35439160	chr10:96921798-96921799	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs536252414	chr10:96921801-96921802	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs34523613	chr10:96921809-96921810	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs71501045	chr10:96921825-96921826	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs36160486	chr10:96921828-96921829	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs142314414	chr10:96921833-96921834	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs548051832	chr10:96921834-96921835	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs142318312	chr10:96921873-96921874	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs11626118	chr10:96921909-96921910	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs9986923	chr10:96921929-96921930	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs534922843	chr10:96921956-96921957	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs9691435	chr10:96921973-96921974	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs557821336	chr10:96921975-96921976	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs572248981	chr10:96921978-96921979	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs540856398	chr10:96921998-96921999	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs577695714	chr10:96922018-96922019	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs575547141	chr10:96922020-96922021	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs386746723	chr10:96922084-96922085	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:69)

Disease	PMID	Source
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Melanoma	18172304	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Ewing''s sarcoma	17952124	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
Prostate cancer	18632612	CNVD
Cockayne syndrome	18421352	CNVD
Glioblastoma	16823260	CNVD
Medulloblastoma	16968546	CNVD
Neuroblastoma	17533364	CNVD
Squamous cell cancer	21044232	CNVD
Glioma	21971842	CNVD
Cancer	21637783	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Lung cancer	18438408	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Usher syndrome	20538994	CNVD
Medulloblastoma	16783165	CNVD
Breast cancer	21785460	CNVD
Acute myeloid leukemia	20729466	CNVD
Prostate cancer	16573809	CNVD
Paraganglioma	17535989	CNVD
Submicroscopic aberration syndrome	21292638	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Pulmonary chondroma	17535989	CNVD
Colorectal cancer	18645599	CNVD
Polyposis syndrome	18645599	CNVD
Prostate cancer	17245344	CNVD
Glioblastoma multiforme	17369134	CNVD
Glioblastoma multiforme	21750150	CNVD
Breast cancer	22032731	CNVD
Ovarian cancer	20844748	CNVD
Glioblastoma multiforme	17002787	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Glioblastoma multiforme	17387387	CNVD
Breast cancer	21364760	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Wilms tumour	21544195	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Urothelial carcinoma	21177765	CNVD
Breast cancer	16397240	CNVD
Chronic lymphocytic leukemia	21049055	CNVD
Cervical cancer	21062161	CNVD
Non-small cell lung cancer	21829676	CNVD
Melanoma	24453001	CNVD
Breast cancer	16608533	CNVD
Intracranial aneurysm	16715129	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	22286061	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:96918800-96923200	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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