Variant report

Variant	esv3406465
Chromosome Location	chr9:21558577-21561125
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF3	chr9:21558990-21560411	A549	lung:	n/a	chr9:21559784-21559793
2	BACH1	chr9:21559221-21560147	H1-hESC	embryonic stem cell:	n/a	n/a
3	BCL3	chr9:21558965-21560497	A549	lung:	n/a	chr9:21559960-21559973
4	BCL3	chr9:21558143-21560436	A549	lung:	n/a	chr9:21559960-21559973
5	BRCA1	chr9:21559598-21559948	Hela-S3	cervix:	n/a	n/a
6	CEBPB	chr9:21559613-21560171	A549	lung:	n/a	n/a
7	CEBPB	chr9:21559583-21560780	Hela-S3	cervix:	n/a	n/a
8	CEBPB	chr9:21560413-21560807	A549	lung:	n/a	n/a
9	CHD1	chr9:21556573-21560925	IMR90	lung:	n/a	n/a
10	CHD2	chr9:21559411-21560568	Hela-S3	cervix:	n/a	n/a
11	CHD2	chr9:21559880-21560138	H1-hESC	embryonic stem cell:	n/a	n/a
12	CHD2	chr9:21559387-21559650	H1-hESC	embryonic stem cell:	n/a	n/a
13	CREB1	chr9:21559201-21560113	A549	lung:	n/a	n/a
14	CTCF	chr9:21559660-21559810	HBMEC	blood vessel:	n/a	chr9:21559703-21559712
15	CTCF	chr9:21559600-21559750	HPAF	blood vessel:	n/a	chr9:21559703-21559712
16	CTCF	chr9:21559660-21559810	GM12875	blood:	n/a	chr9:21559703-21559712
17	CTCF	chr9:21559620-21559770	GM12874	blood:	n/a	chr9:21559703-21559712
18	CTCF	chr9:21559540-21559690	RPTEC	kidney:	n/a	n/a
19	CTCF	chr9:21559668-21559793	MCF-7	breast:	n/a	chr9:21559703-21559712
20	CTCF	chr9:21559620-21559770	SAEC	small airway:	n/a	chr9:21559703-21559712
21	CTCF	chr9:21559660-21559810	A549	lung:	n/a	chr9:21559703-21559712
22	CTCF	chr9:21559664-21559728	GM10266	blood:	n/a	chr9:21559703-21559712
23	CTCF	chr9:21559680-21559830	GM12870	blood:	n/a	chr9:21559703-21559712
24	CTCF	chr9:21559580-21559730	HRPEpiC	eye:	n/a	chr9:21559703-21559712
25	CTCF	chr9:21559706-21559746	GM12878	blood:	n/a	n/a
26	CTCF	chr9:21559600-21559750	HEK293	kidney:	n/a	chr9:21559703-21559712
27	CTCF	chr9:21559700-21559850	GM12873	blood:	n/a	chr9:21559703-21559712
28	CTCF	chr9:21559580-21559730	GM12864	blood:	n/a	chr9:21559703-21559712
29	CTCF	chr9:21559660-21559810	GM12874	blood:	n/a	chr9:21559703-21559712
30	CTCF	chr9:21559660-21559810	HAc	cerebellar:	n/a	chr9:21559703-21559712
31	CTCF	chr9:21559640-21559790	GM12869	blood:	n/a	chr9:21559703-21559712
32	CTCF	chr9:21559617-21559806	IMR90	lung:	n/a	chr9:21559703-21559712
33	CTCF	chr9:21559580-21559730	HFF	foreskin:	n/a	chr9:21559703-21559712
34	CTCF	chr9:21559660-21559810	WERI-Rb-1	eye:	n/a	chr9:21559703-21559712
35	CTCF	chr9:21559640-21559790	GM12873	blood:	n/a	chr9:21559703-21559712
36	CTCF	chr9:21560080-21560230	HBMEC	blood vessel:	n/a	n/a
37	CTCF	chr9:21559620-21559770	Caco-2	colon:	n/a	chr9:21559703-21559712
38	CTCF	chr9:21559680-21559830	GM12866	blood:	n/a	chr9:21559703-21559712
39	CTCF	chr9:21559681-21559762	GM12891	blood:	n/a	chr9:21559703-21559712
40	CTCF	chr9:21559629-21559829	A549	lung:	n/a	chr9:21559703-21559712
41	CTCF	chr9:21559669-21559805	Hela-S3	cervix:	n/a	chr9:21559703-21559712
42	CTCF	chr9:21559695-21559731	GM19240	blood:	n/a	chr9:21559703-21559712
43	CTCF	chr9:21559660-21559810	HRE	kidney:	n/a	chr9:21559703-21559712
44	CTCF	chr9:21559664-21559807	NHEK	skin:	n/a	chr9:21559703-21559712
45	CTCF	chr9:21559640-21559790	GM12871	blood:	n/a	chr9:21559703-21559712
46	CTCF	chr9:21559640-21559790	Caco-2	colon:	n/a	chr9:21559703-21559712
47	CTCF	chr9:21559661-21559761	MCF-7	breast:	n/a	chr9:21559703-21559712
48	CTCF	chr9:21559640-21559790	SAEC	small airway:	n/a	chr9:21559703-21559712
49	CTCF	chr9:21559660-21559810	HEK293	kidney:	n/a	chr9:21559703-21559712
50	CTCF	chr9:21559600-21559750	HCPEpiC	choroid plexus:	n/a	chr9:21559703-21559712

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:21558871-21558921	PANC-1	pancreas:	n/a
2	chr9:21560355-21560405	PFSK-1	brain:	n/a
3	chr9:21558871-21558921	HIPEpiC	eye:	n/a
4	chr9:21558871-21558921	AG04450	lung:	fetal
5	chr9:21559710-21559760	Caco-2	colon:	n/a
6	chr9:21559551-21559601	IMR90	lung:	fetal
7	chr9:21560355-21560405	AG04450	lung:	fetal
8	chr9:21559710-21559760	RPTEC	kidney:	n/a
9	chr9:21559710-21559760	NHDF-neo	bronchial:	n/a
10	chr9:21560355-21560405	SKMC	muscle:	n/a
11	chr9:21558871-21558921	U87	brain:	n/a
12	chr9:21558871-21558921	PFSK-1	brain:	n/a
13	chr9:21560355-21560405	BJ	skin:	n/a
14	chr9:21560355-21560405	HL-60	blood:	n/a
15	chr9:21558871-21558921	NHDF-neo	bronchial:	n/a
16	chr9:21560355-21560405	Caco-2	colon:	n/a
17	chr9:21559710-21559760	T-47D	breast:	n/a
18	chr9:21560355-21560405	HCM	heart:	n/a
19	chr9:21559551-21559601	AG09309	skin:	n/a
20	chr9:21560355-21560405	AG09309	skin:	n/a
21	chr9:21558871-21558921	HRPEpiC	eye:	n/a
22	chr9:21559551-21559601	BJ	skin:	n/a
23	chr9:21560355-21560405	H1-hESC	embryonic stem cell:	embryo
24	chr9:21558871-21558921	AG09319	gingival:	n/a
25	chr9:21560355-21560405	HCF	heart:	n/a
26	chr9:21560355-21560405	NB4	blood:	n/a
27	chr9:21558871-21558921	GM12891	blood:	n/a
28	chr9:21559710-21559760	SK-N-SH_RA	brain:	n/a
29	chr9:21559551-21559601	Hela-S3	cervix:	n/a
30	chr9:21559710-21559760	SK-N-SH	brain:	n/a
31	chr9:21558871-21558921	MCF-7	breast:	n/a
32	chr9:21559710-21559760	HCT-116	colon:	n/a
33	chr9:21558871-21558921	HNPCEpiC	eye:	n/a
34	chr9:21559551-21559601	AG10803	skin:	n/a
35	chr9:21560355-21560405	T-47D	breast:	n/a
36	chr9:21558871-21558921	NB4	blood:	n/a
37	chr9:21559551-21559601	ECC-1	luminal epithelium:	n/a
38	chr9:21560355-21560405	HIPEpiC	eye:	n/a
39	chr9:21560355-21560405	SK-N-MC	brain:	n/a
40	chr9:21559551-21559601	HCF	heart:	n/a
41	chr9:21559710-21559760	SAEC	small airway:	n/a
42	chr9:21558871-21558921	SAEC	small airway:	n/a
43	chr9:21559551-21559601	HepG2	liver:	n/a
44	chr9:21560355-21560405	HEEpiC	esophagus:	n/a
45	chr9:21559710-21559760	HUVEC	blood vessel:	n/a
46	chr9:21559551-21559601	BE2_C	brain:	n/a
47	chr9:21559551-21559601	HEEpiC	esophagus:	n/a
48	chr9:21558871-21558921	NHBE	bronchial:	n/a
49	chr9:21559551-21559601	RPTEC	kidney:	n/a
50	chr9:21559710-21559760	HL-60	blood:	n/a

No.	Distal block	Cell Line	Cell type
1	chr7:100026744..100027492-chr9:21559602..21560168,2	Hela-S3	cervix:
2	chr6:74230065..74230819-chr9:21559626..21560366,2	Hela-S3	cervix:
3	chr3:185826786..185827686-chr9:21559259..21559882,2	HCT-116	colon:
4	chr19:24269760..24270482-chr9:21560198..21560710,2	Hela-S3	cervix:
5	chr1:149223886..149224467-chr9:21559638..21560548,2	Hela-S3	cervix:
6	chr17:76135557..76136462-chr9:21558206..21559124,2	HCT-116	colon:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-IFNE-1	chr9:21559488-21559668	ENSG00000171889
2	lnc-IFNE-1	chr9:21559488-21559697	NONHSAT130385
3	lnc-IFNE-1	chr9:21559747-21559832	NONHSAT130386

Variant related genes	Relation type
MIR31HG	TF binding region
MIR31HG	CpG island
ENSG00000146834	chromatin interactions
ENSG00000206737	chromatin interactions
ENSG00000244405	chromatin interactions
ENSG00000213096	chromatin interactions
ENSG00000156508	chromatin interactions
NDEL1	miRNA target sites

Extended variants
information (count: 100 )
Associated
traits (count: 153 )

Variant overlapped rSNPs/rCNVs (count:100 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs540965045	chr9:21558613-21558614	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs560542918	chr9:21558633-21558634	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs574377356	chr9:21558643-21558644	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs183000999	chr9:21558660-21558661	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs148407631	chr9:21558684-21558685	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs561828619	chr9:21558707-21558708	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs115856489	chr9:21558725-21558726	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs552784740	chr9:21558751-21558752	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs375478400	chr9:21558754-21558755	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs1452650	chr9:21558781-21558782	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs201882748	chr9:21558793-21558794	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs571548377	chr9:21558794-21558795	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs73424400	chr9:21558807-21558808	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs188561647	chr9:21558835-21558836	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
15	rs568319829	chr9:21558839-21558840	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
16	rs567477540	chr9:21558896-21558897	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
17	rs537463864	chr9:21558911-21558912	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
18	rs550765070	chr9:21558916-21558917	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
19	rs78187944	chr9:21558945-21558946	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
20	rs539577179	chr9:21558986-21558987	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
21	rs75875093	chr9:21559002-21559003	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs7029522	chr9:21559011-21559012	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs534558574	chr9:21559019-21559020	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs554857189	chr9:21559052-21559053	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs574316342	chr9:21559067-21559068	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs374345289	chr9:21559076-21559077	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs530975258	chr9:21559097-21559098	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs543426884	chr9:21559119-21559120	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs556629228	chr9:21559122-21559123	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs563165979	chr9:21559154-21559155	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs576858018	chr9:21559192-21559193	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs80002834	chr9:21559217-21559218	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
33	rs559985594	chr9:21559232-21559233	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
34	rs528702037	chr9:21559286-21559287	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs574930005	chr9:21559321-21559322	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs371592023	chr9:21559352-21559353	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs562422033	chr9:21559359-21559360	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs530786300	chr9:21559375-21559376	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs111622209	chr9:21559376-21559377	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs550935953	chr9:21559396-21559397	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs570794658	chr9:21559488-21559489	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
42	rs368548746	chr9:21559497-21559498	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
43	rs539541182	chr9:21559557-21559558	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
44	rs192869790	chr9:21559565-21559566	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
45	rs565497905	chr9:21559626-21559627	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
46	rs534523609	chr9:21559636-21559637	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
47	rs554539055	chr9:21559637-21559638	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
48	rs549791076	chr9:21559646-21559647	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS	Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
49	rs530413700	chr9:21559651-21559652	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS	Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
50	rs569961169	chr9:21559659-21559660	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS	Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:153)

Disease	PMID	Source
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Melanoma	18172304	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Lung cancer	18438408	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Chronic myeloid leukemia	21384125	CNVD
Breast cancer	21785460	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Renal cell carcinoma	21668985	CNVD
Myelodysplastic syndrome	21251322	CNVD
Autism	22495311	CNVD
Hepatocellular carcinoma	18803288	CNVD
Metanephric adenoma	20802469	CNVD
Developmental delay	21147756	CNVD
Pilocytic astrocytoma	18670637	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Melanoma	22183965	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Non-small cell lung cancer	19010865	CNVD
Myoepithelioma	18604193	CNVD
Cancer	22183965	CNVD
Glioblastoma multiforme	21569311	CNVD
Myelofibrosis	22110671	CNVD
Ewing''s sarcoma	22429812	CNVD
Neuroblastoma	21899760	CNVD
Glioblastoma multiforme	19435819	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Glioblastoma multiforme	22291905	CNVD
Lung cancer	21911935	CNVD
Primary central nervous system lymphoma	21088137	CNVD
head and neck squamous cell carcinoma	21798897	CNVD
Cancer	21253487	CNVD
Glioblastoma multiforme	22286061	CNVD
Intracranial ependymoma	16609018	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Glioblastoma multiforme	21922591	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Urothelial cell carcinoma	18451213	CNVD
Glioma	17123091	CNVD
Mental retardation	17124404	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Acute lymphoblastic leukemia	18768390	CNVD
Leukemia	19602459	CNVD
Acute monocytic leukemia	16498392	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Leukemia	18688285	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Acute myeloid leukemia	19651601	CNVD
Coronary Disease	20032323	CNVD
Squamous cell cancer	20885788	CNVD
Hirschsprung''s Disease	21712996	CNVD
Cancer	21732550	CNVD
Gastric cancer	22539939	CNVD
Cancer	21183584	CNVD
T-cell lymphomas	19863542	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Metastatic melanoma	18483359	CNVD
Non-small cell lung cancer	20864512	CNVD
Cervical cancer	21062161	CNVD
Acute myeloid leukemia	16864856	CNVD
Glioblastoma	17090523	CNVD
Lung cancer	16773561	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Colorectal cancer	16774939	CNVD
Bladder cancer	19088036	CNVD
Colorectal cancer	16272173	CNVD
Melanoma	16977458	CNVD
Glioblastoma multiforme	17369134	CNVD
Chagasic megaesophagus	20163722	CNVD
Melanoma	19566914	CNVD
Squamous cell cancer	19047905	CNVD
Lung adenocarcinoma	19525976	CNVD
Lung cancer	19525976	CNVD
Hodgkin''s lymphoma	18179710	CNVD
Glioma	20126413	CNVD
Melanoma	17363583	CNVD
Glioblastoma multiforme	19115005	CNVD
Glioblastoma multiforme	21525872	CNVD
Glioblastoma multiforme	21138945	CNVD
Adenoid cystic carcinoma	18332873	CNVD
Breast cancer	21364760	CNVD
Cancer	20581869	CNVD
Multiple myeloma	17550852	CNVD
Oral cancer	22144094	CNVD
Lung cancer	21569311	CNVD
Epilepsy	20502679	CNVD
Barrett''s syndrome	19417022	CNVD
Autism	20858261	CNVD
Epilepsy	20858261	CNVD
Mental retardation	20858261	CNVD
Cancer	20164920	CNVD
Non-small cell lung cancer	16651412	CNVD
Breast cancer	17142309	CNVD

Chromatin state (count:406 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:21552600-21558600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr9:21553000-21558600	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr9:21554800-21558800	Transcr. at gene 5' and 3'	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr9:21554800-21560600	Active TSS	Breast Myoepithelial Primary Cells	Breast
5	chr9:21555000-21558600	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr9:21555200-21558600	Active TSS	Fetal Intestine Small	intestine
7	chr9:21555200-21560000	Active TSS	Hela-S3	cervix
8	chr9:21555200-21560800	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
9	chr9:21555400-21558600	Active TSS	Duodenum Mucosa	Duodenum
10	chr9:21555800-21558600	Weak transcription	HSMMtube	muscle
11	chr9:21555800-21560200	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr9:21556200-21559200	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
13	chr9:21556200-21559200	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
14	chr9:21556200-21560000	Active TSS	HMEC	breast
15	chr9:21556200-21560200	Active TSS	NH-A	brain
16	chr9:21556200-21560200	Active TSS	Osteobl	bone
17	chr9:21556200-21560400	Active TSS	NHLF	lung
18	chr9:21556400-21560000	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
19	chr9:21556400-21560400	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
20	chr9:21556400-21560600	Active TSS	NHDF-Ad	bronchial
21	chr9:21556600-21560200	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
22	chr9:21557000-21558800	Active TSS	Stomach Mucosa	stomach
23	chr9:21557000-21560400	Bivalent/Poised TSS	Duodenum Smooth Muscle	Duodenum
24	chr9:21557400-21559400	Transcr. at gene 5' and 3'	A549	lung
25	chr9:21557400-21560000	Active TSS	HUVEC	blood vessel
26	chr9:21557800-21558600	Bivalent Enhancer	Primary T killer naive cells fromperipheralblood	blood
27	chr9:21558000-21558800	Flanking Bivalent TSS/Enh	HUES64 Cell Line	embryonic stem cell
28	chr9:21558000-21558800	Transcr. at gene 5' and 3'	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
29	chr9:21558200-21558600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
30	chr9:21558200-21558800	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
31	chr9:21558200-21558800	Flanking Bivalent TSS/Enh	Primary T helper cells PMA-I stimulated	--
32	chr9:21558200-21559200	Transcr. at gene 5' and 3'	NHEK	skin
33	chr9:21558200-21560200	Active TSS	ES-I3 Cell Line	embryonic stem cell
34	chr9:21558200-21560200	Bivalent/Poised TSS	Fetal Intestine Large	intestine
35	chr9:21558200-21560400	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
36	chr9:21558200-21560600	Active TSS	HSMM	muscle
37	chr9:21558200-21560800	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
38	chr9:21558400-21558600	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
39	chr9:21558400-21558600	Bivalent Enhancer	Primary T cells from cord blood	blood
40	chr9:21558400-21558600	Bivalent Enhancer	Primary T helper naive cells from peripheral blood	blood
41	chr9:21558400-21558600	Bivalent Enhancer	Primary T helper 17 cells PMA-I stimulated	--
42	chr9:21558400-21558600	Bivalent Enhancer	Primary T helper cells fromperipheralblood	blood
43	chr9:21558400-21558600	Active TSS	Fetal Stomach	stomach
44	chr9:21558400-21558800	Bivalent Enhancer	Primary T helper memory cells from peripheral blood 2	blood
45	chr9:21558400-21558800	Bivalent Enhancer	Primary T helper memory cells from peripheral blood 1	blood
46	chr9:21558400-21558800	Bivalent Enhancer	Primary T killer memory cells from peripheral blood	blood
47	chr9:21558400-21559200	Transcr. at gene 5' and 3'	Muscle Satellite Cultured Cells	--
48	chr9:21558400-21560200	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
49	chr9:21558400-21560400	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
50	chr9:21558400-21560400	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell

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