Variant report

Variant esv3424039
Chromosome Location chr6:29439297-29504564
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:29442600-29443600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr6:29442800-29443200 Enhancers HMEC breast
3 chr6:29445400-29446200 Enhancers K562 blood
4 chr6:29450800-29451600 Enhancers NH-A brain
5 chr6:29451200-29452200 Enhancers Liver Liver
6 chr6:29452200-29457000 Weak transcription Liver Liver
7 chr6:29454000-29455600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr6:29454200-29454800 Enhancers Primary hematopoietic stem cells blood
9 chr6:29454200-29455000 Enhancers Primary hematopoietic stem cells short term culture blood
10 chr6:29454200-29455400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr6:29454400-29456000 Enhancers K562 blood
12 chr6:29454800-29457800 Weak transcription Primary hematopoietic stem cells blood
13 chr6:29455000-29457200 Weak transcription Primary hematopoietic stem cells short term culture blood
14 chr6:29455400-29457200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr6:29455600-29457200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr6:29456000-29457800 Weak transcription K562 blood
17 chr6:29457000-29457400 Enhancers Liver Liver
18 chr6:29457200-29458000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr6:29457200-29459400 Enhancers Primary hematopoietic stem cells short term culture blood
20 chr6:29457200-29461200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr6:29457800-29458600 Enhancers Primary neutrophils fromperipheralblood blood
22 chr6:29457800-29459800 Enhancers Primary hematopoietic stem cells blood
23 chr6:29457800-29459800 Enhancers K562 blood
24 chr6:29458000-29459000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr6:29459000-29459600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
26 chr6:29459000-29461200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr6:29459400-29462200 Weak transcription Primary hematopoietic stem cells short term culture blood
28 chr6:29459800-29460200 Weak transcription Primary hematopoietic stem cells blood
29 chr6:29459800-29461800 Weak transcription K562 blood
30 chr6:29460200-29461000 Enhancers Primary hematopoietic stem cells blood
31 chr6:29461800-29462400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
32 chr6:29461800-29462600 Enhancers K562 blood
33 chr6:29462200-29462400 Enhancers Primary hematopoietic stem cells short term culture blood
34 chr6:29464000-29464400 Enhancers K562 blood
35 chr6:29468200-29468400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
36 chr6:29468400-29468600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
37 chr6:29468600-29496200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
38 chr6:29469800-29471400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr6:29469800-29471400 Enhancers NH-A brain
40 chr6:29470000-29470200 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr6:29470200-29470600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr6:29470200-29470600 Enhancers NHEK skin
43 chr6:29470200-29470800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr6:29470200-29471200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr6:29470200-29471200 Enhancers NHDF-Ad bronchial
46 chr6:29470400-29471000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr6:29472800-29473200 Enhancers HepG2 liver
48 chr6:29475200-29477800 Enhancers GM12878-XiMat blood
49 chr6:29475600-29475800 Enhancers HSMMtube muscle
50 chr6:29475800-29476000 Flanking Active TSS HSMMtube muscle

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