Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BHLHE40	chr6:29445624-29445942	K562	blood:	n/a	n/a

Variant related genes	Relation type
MAS1LP1	TF binding region

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10484547	0.90[ASN][1000 genomes]
rs16894919	0.84[ASN][1000 genomes]
rs16894964	0.98[ASN][1000 genomes]
rs16894967	0.90[ASN][1000 genomes]
rs16894969	0.90[ASN][1000 genomes]
rs17184114	0.97[ASN][1000 genomes]
rs2066951	0.90[ASN][1000 genomes]
rs2073148	0.84[ASN][1000 genomes]
rs2107189	0.88[ASN][1000 genomes]
rs3025657	0.94[ASN][1000 genomes]
rs3025669	0.94[ASN][1000 genomes]
rs362531	0.85[ASN][1000 genomes]
rs362532	0.85[ASN][1000 genomes]
rs57396831	0.87[ASN][1000 genomes]
rs58008302	0.94[ASN][1000 genomes]
rs58211986	0.90[ASN][1000 genomes]
rs60219685	0.94[ASN][1000 genomes]
rs6908631	0.94[ASN][1000 genomes]
rs6920668	0.94[ASN][1000 genomes]
rs6925408	0.90[ASN][1000 genomes]
rs6925744	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6925869	0.85[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs6931702	0.94[ASN][1000 genomes]
rs6933331	0.94[ASN][1000 genomes]
rs73402748	0.94[ASN][1000 genomes]
rs73402770	0.94[ASN][1000 genomes]
rs73402788	0.91[ASN][1000 genomes]
rs7739905	0.94[ASN][1000 genomes]
rs7739937	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3424039	chr6:29439297-29504564	Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:29445400-29446200	Enhancers	K562	blood

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