No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs149022450 |
chr15:41860425-41860426 |
Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Weak transcription Strong transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs375950983 |
chr15:41860446-41860447 |
Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Weak transcription Strong transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs140010890 |
chr15:41860450-41860451 |
Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Weak transcription Strong transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs142466939 |
chr15:41860480-41860481 |
Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Weak transcription Strong transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs12148316 |
chr15:41860490-41860491 |
Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Weak transcription Strong transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
6 |
rs542143718 |
chr15:41860491-41860492 |
Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Weak transcription Strong transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs140553891 |
chr15:41860505-41860506 |
Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Weak transcription Strong transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs527331118 |
chr15:41860507-41860508 |
Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Weak transcription Strong transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs150035019 |
chr15:41860510-41860511 |
Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Weak transcription Strong transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs147808646 |
chr15:41860512-41860513 |
Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Weak transcription Strong transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs368326516 |
chr15:41860515-41860516 |
Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Weak transcription Strong transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs201515583 |
chr15:41860518-41860519 |
Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Weak transcription Strong transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs372263785 |
chr15:41860527-41860528 |
Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Weak transcription Strong transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs55689932 |
chr15:41860565-41860566 |
Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Weak transcription Strong transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs564021298 |
chr15:41860650-41860651 |
Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Strong transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs117053817 |
chr15:41860668-41860669 |
Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Strong transcription
|
TF binding regionCpG islandChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs2289743 |
chr15:41860698-41860699 |
Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Strong transcription
|
TF binding regionCpG islandChromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
18 |
rs570262885 |
chr15:41860727-41860728 |
Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS Weak transcription Strong transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs529451134 |
chr15:41860831-41860832 |
Enhancers Weak transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Strong transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs541765827 |
chr15:41860841-41860842 |
Enhancers Weak transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Strong transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs549308066 |
chr15:41860842-41860843 |
Enhancers Weak transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Strong transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs566030910 |
chr15:41860945-41860946 |
Enhancers Weak transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs534939819 |
chr15:41860965-41860966 |
Enhancers Weak transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs557739128 |
chr15:41860978-41860979 |
Enhancers Weak transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs143029967 |
chr15:41860983-41860984 |
Enhancers Weak transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs535113436 |
chr15:41861013-41861014 |
Enhancers Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs28704130 |
chr15:41861040-41861041 |
Enhancers Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs148272463 |
chr15:41861059-41861060 |
Enhancers Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs199641637 |
chr15:41861126-41861127 |
Enhancers Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs375597382 |
chr15:41861142-41861143 |
Enhancers Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs576219159 |
chr15:41861145-41861146 |
Enhancers Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs200610593 |
chr15:41861146-41861147 |
Enhancers Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs34587671 |
chr15:41861153-41861154 |
Enhancers Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs201575640 |
chr15:41861154-41861155 |
Enhancers Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs199712738 |
chr15:41861163-41861164 |
Enhancers Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs555742720 |
chr15:41861167-41861168 |
Enhancers Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|