Variant report

Variant	esv3440011
Chromosome Location	chr9:15509577-15512125
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:15510964-15511424	K562	blood:	n/a	n/a
2	ATF1	chr9:15510864-15511555	K562	blood:	n/a	n/a
3	ATF2	chr9:15510877-15511546	GM12878	blood:	n/a	n/a
4	ATF2	chr9:15510476-15511627	GM12878	blood:	n/a	n/a
5	ATF2	chr9:15510945-15511509	H1-hESC	embryonic stem cell:	n/a	n/a
6	ATF2	chr9:15511041-15511502	H1-hESC	embryonic stem cell:	n/a	n/a
7	ATF3	chr9:15510742-15510991	K562	blood:	n/a	chr9:15510783-15510792
8	BACH1	chr9:15510100-15510268	H1-hESC	embryonic stem cell:	n/a	n/a
9	BATF	chr9:15510995-15511430	GM12878	blood:	n/a	chr9:15511159-15511168
10	BCL11A	chr9:15511025-15511499	GM12878	blood:	n/a	chr9:15511461-15511469
11	BCL3	chr9:15510847-15511650	A549	lung:	n/a	chr9:15511461-15511469
12	BCL3	chr9:15510482-15511579	GM12878	blood:	n/a	chr9:15511461-15511469 chr9:15510697-15510710
13	BCLAF1	chr9:15510379-15511193	GM12878	blood:	n/a	chr9:15510697-15510710
14	BCLAF1	chr9:15510407-15511657	GM12878	blood:	n/a	chr9:15511461-15511469 chr9:15510697-15510710
15	BHLHE40	chr9:15510466-15511515	K562	blood:	n/a	chr9:15511225-15511241 chr9:15510702-15510718 chr9:15510723-15510739
16	BHLHE40	chr9:15510677-15511396	HepG2	liver:	n/a	chr9:15511225-15511241 chr9:15510702-15510718 chr9:15510723-15510739
17	BHLHE40	chr9:15510563-15511714	GM12878	blood:	n/a	chr9:15511225-15511241 chr9:15510702-15510718 chr9:15510723-15510739
18	BHLHE40	chr9:15510899-15511325	A549	lung:	n/a	chr9:15511225-15511241
19	BRCA1	chr9:15510037-15510323	H1-hESC	embryonic stem cell:	n/a	n/a
20	BRCA1	chr9:15510894-15511549	GM12878	blood:	n/a	n/a
21	BRCA1	chr9:15510958-15511316	HepG2	liver:	n/a	n/a
22	BRCA1	chr9:15510632-15510676	GM12878	blood:	n/a	n/a
23	BRCA1	chr9:15510896-15511730	Hela-S3	cervix:	n/a	n/a
24	BRCA1	chr9:15510939-15511494	H1-hESC	embryonic stem cell:	n/a	n/a
25	CCNT2	chr9:15510085-15511554	K562	blood:	n/a	chr9:15510783-15510792
26	CEBPB	chr9:15510967-15511627	A549	lung:	n/a	n/a
27	CEBPB	chr9:15510865-15511701	GM12878	blood:	n/a	n/a
28	CEBPB	chr9:15510983-15511612	H1-hESC	embryonic stem cell:	n/a	n/a
29	CEBPB	chr9:15510800-15511697	Hela-S3	cervix:	n/a	n/a
30	CEBPB	chr9:15510762-15511641	K562	blood:	n/a	n/a
31	CEBPB	chr9:15511111-15511508	K562	blood:	n/a	n/a
32	CEBPD	chr9:15510750-15511241	HepG2	liver:	n/a	n/a
33	CHD1	chr9:15508987-15513035	GM12878	blood:	n/a	chr9:15510554-15510564 chr9:15510784-15510794 chr9:15510444-15510454 chr9:15511226-15511236
34	CHD1	chr9:15509339-15512413	IMR90	lung:	n/a	chr9:15510554-15510564 chr9:15510784-15510794 chr9:15510444-15510454 chr9:15511226-15511236
35	CHD1	chr9:15509050-15513782	H1-hESC	embryonic stem cell:	n/a	chr9:15510554-15510564 chr9:15510784-15510794 chr9:15510444-15510454 chr9:15511226-15511236
36	CHD2	chr9:15510719-15511230	HepG2	liver:	n/a	chr9:15510784-15510794
37	CHD2	chr9:15510204-15511626	Hela-S3	cervix:	n/a	chr9:15510554-15510564 chr9:15510784-15510794 chr9:15510444-15510454 chr9:15511226-15511236
38	CHD2	chr9:15510571-15511506	H1-hESC	embryonic stem cell:	n/a	chr9:15510784-15510794 chr9:15511226-15511236
39	CHD2	chr9:15509866-15511247	K562	blood:	n/a	chr9:15510554-15510564 chr9:15510784-15510794 chr9:15510444-15510454 chr9:15511226-15511236
40	CHD2	chr9:15510045-15510302	H1-hESC	embryonic stem cell:	n/a	n/a
41	CHD2	chr9:15510404-15510405	HepG2	liver:	n/a	n/a
42	CHD2	chr9:15509922-15511672	GM12878	blood:	n/a	chr9:15510554-15510564 chr9:15510784-15510794 chr9:15510444-15510454 chr9:15511226-15511236
43	CREB1	chr9:15510616-15511224	K562	blood:	n/a	n/a
44	CREB1	chr9:15510287-15511563	HepG2	liver:	n/a	n/a
45	CREB1	chr9:15510623-15511598	GM12878	blood:	n/a	n/a
46	CREB1	chr9:15510571-15511346	A549	lung:	n/a	n/a
47	CREB1	chr9:15510620-15511386	H1-hESC	embryonic stem cell:	n/a	n/a
48	CREB1	chr9:15510630-15511543	H1-hESC	embryonic stem cell:	n/a	n/a
49	CTBP2	chr9:15510645-15511497	H1-hESC	embryonic stem cell:	n/a	n/a
50	CTCF	chr9:15510868-15511004	GM19238	blood:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:15510574-15510624	GM12891	blood:	n/a
2	chr9:15510228-15510278	HCF	heart:	n/a
3	chr9:15510574-15510624	SK-N-SH	brain:	n/a
4	chr9:15510857-15510907	MCF10A-Er-Src	breast:	n/a
5	chr9:15511094-15511144	NHDF-neo	bronchial:	n/a
6	chr9:15510228-15510278	SAEC	small airway:	n/a
7	chr9:15511231-15511281	Hepatocyte	liver:	n/a
8	chr9:15510228-15510278	HEEpiC	esophagus:	n/a
9	chr9:15511231-15511281	HL-60	blood:	n/a
10	chr9:15510574-15510624	SKMC	muscle:	n/a
11	chr9:15511220-15511270	HAEpiC	amniotic membrane:	n/a
12	chr9:15511503-15511553	HCM	heart:	n/a
13	chr9:15511220-15511270	NHBE	bronchial:	n/a
14	chr9:15510150-15510200	T-47D	breast:	n/a
15	chr9:15510228-15510278	HNPCEpiC	eye:	n/a
16	chr9:15511231-15511281	HCT-116	colon:	n/a
17	chr9:15510574-15510624	HRE	kidney:	n/a
18	chr9:15511231-15511281	SK-N-MC	brain:	n/a
19	chr9:15511231-15511281	HAEpiC	amniotic membrane:	n/a
20	chr9:15511358-15511408	GM12878	blood:	n/a
21	chr9:15511220-15511270	HMEC	breast:	n/a
22	chr9:15511503-15511553	ovcar-3	ovarian:	n/a
23	chr9:15510857-15510907	CMK	blood:	n/a
24	chr9:15510461-15510511	AG04449	skin:	fetal
25	chr9:15511231-15511281	NHDF-neo	bronchial:	n/a
26	chr9:15511231-15511281	HEEpiC	esophagus:	n/a
27	chr9:15510150-15510200	LNCaP	prostate:	n/a
28	chr9:15511220-15511270	Caco-2	colon:	n/a
29	chr9:15511503-15511553	HCPEpiC	choroid plexus:	n/a
30	chr9:15511503-15511553	SK-N-MC	brain:	n/a
31	chr9:15511220-15511270	ovcar-3	ovarian:	n/a
32	chr9:15511503-15511553	HRE	kidney:	n/a
33	chr9:15510228-15510278	HepG2	liver:	n/a
34	chr9:15510574-15510624	GM19239	blood:	n/a
35	chr9:15510857-15510907	ECC-1	luminal epithelium:	n/a
36	chr9:15511220-15511270	HRE	kidney:	n/a
37	chr9:15511220-15511270	NHDF-neo	bronchial:	n/a
38	chr9:15511220-15511270	ECC-1	luminal epithelium:	n/a
39	chr9:15510150-15510200	NB4	blood:	n/a
40	chr9:15510574-15510624	NB4	blood:	n/a
41	chr9:15510228-15510278	HPAEpiC	pulmonary alveolar:	n/a
42	chr9:15511094-15511144	T-47D	breast:	n/a
43	chr9:15511094-15511144	A549	lung:	n/a
44	chr9:15510461-15510511	NT2-D1	testis:	n/a
45	chr9:15511358-15511408	NHDF-neo	bronchial:	n/a
46	chr9:15510150-15510200	HIPEpiC	eye:	n/a
47	chr9:15510574-15510624	PANC-1	pancreas:	n/a
48	chr9:15510228-15510278	AoSMC	blood vessel:	n/a
49	chr9:15510857-15510907	AG04450	lung:	fetal
50	chr9:15511231-15511281	SAEC	small airway:	n/a

No.	Distal block	Cell Line	Cell type
1	chr9:15421340..15424109-chr9:15510012..15511838,2	K562	blood:
2	chr9:15512114..15513693-chr9:15523609..15526046,2	MCF-7	breast:
3	chr9:15509318..15512022-chr9:15550389..15555494,9	MCF-7	breast:
4	chr9:15511224..15513667-chr9:15516724..15518268,2	K562	blood:
5	chr3:148847380..148847959-chr9:15510544..15511291,2	NB4	blood:
6	chr9:15507256..15510187-chr9:15510704..15514473,5	K562	blood:
7	chr4:37978419..37979411-chr9:15510415..15510949,2	NB4	blood:
8	chr9:15510875..15512396-chr9:15551516..15553319,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-TTC39B-5	chr9:15510815-15510944	NONHSAT130267
2	lnc-TTC39B-5	chr9:15510815-15510989	NONHSAT130268
3	lnc-TTC39B-5	chr9:15510115-15510324	NONHSAT130268
4	lnc-TTC39B-5	chr9:15510115-15510327	NONHSAT130269
5	lnc-TTC39B-5	chr9:15510815-15510987	NONHSAT130269
6	lnc-TTC39B-5	chr9:15510115-15510327	NONHSAT130267

Variant related genes	Relation type
PSIP1	TF binding region
PSIP1	CpG island
ENSG00000164975	chromatin interactions
ENSG00000164989	chromatin interactions
ENSG00000065882	chromatin interactions
ENSG00000164985	chromatin interactions
ENSG00000163755	chromatin interactions

Extended variants
information (count: 125 )
Associated
traits (count: 89 )

Variant overlapped rSNPs/rCNVs (count:125 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs545551297	chr9:15509586-15509587	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
2	rs557848149	chr9:15509611-15509612	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs572886580	chr9:15509615-15509616	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs2665503	chr9:15509619-15509620	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
5	rs527410387	chr9:15509639-15509640	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs77999755	chr9:15509646-15509647	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs544525968	chr9:15509652-15509653	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs2777948	chr9:15509654-15509655	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs2795129	chr9:15509655-15509656	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs74802299	chr9:15509662-15509663	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs375397002	chr9:15509663-15509664	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs189525268	chr9:15509671-15509672	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs533573325	chr9:15509693-15509694	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs532654006	chr9:15509718-15509719	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs62571016	chr9:15509724-15509725	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
16	rs560616464	chr9:15509725-15509726	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs143827459	chr9:15509726-15509727	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs548956628	chr9:15509743-15509744	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs567332884	chr9:15509756-15509757	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs538103604	chr9:15509761-15509762	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs569351824	chr9:15509799-15509800	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs550084355	chr9:15509815-15509816	Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs571714750	chr9:15509838-15509839	Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs539206540	chr9:15509849-15509850	Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs13293687	chr9:15509901-15509902	Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs554099640	chr9:15509924-15509925	Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs572890344	chr9:15509953-15509954	Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs533913452	chr9:15509954-15509955	Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs62571017	chr9:15509963-15509964	Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Enhancers	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
30	rs544489120	chr9:15510014-15510015	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
31	rs562787349	chr9:15510016-15510017	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs148022076	chr9:15510019-15510020	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs577890801	chr9:15510026-15510027	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
34	rs568510852	chr9:15510032-15510033	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
35	rs368076672	chr9:15510057-15510058	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs201496057	chr9:15510068-15510069	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs184124668	chr9:15510074-15510075	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs375047550	chr9:15510076-15510077	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs369198954	chr9:15510088-15510089	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs147272916	chr9:15510107-15510108	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
41	rs551504986	chr9:15510148-15510149	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
42	rs139542300	chr9:15510157-15510158	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
43	rs149706980	chr9:15510177-15510178	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
44	rs200694835	chr9:15510198-15510199	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
45	rs377343668	chr9:15510200-15510201	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
46	rs531611970	chr9:15510204-15510205	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
47	rs375530010	chr9:15510211-15510212	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
48	rs373245264	chr9:15510220-15510221	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
49	rs370717909	chr9:15510227-15510228	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
50	rs571888419	chr9:15510238-15510239	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Weak transcription	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:89)

Disease	PMID	Source
Chronic lymphocytic leukemia	21546498	CNVD
abnormal development	18461090	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Melanoma	18172304	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Chronic myeloid leukemia	21384125	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Lung cancer	18438408	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	21785460	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Renal cell carcinoma	21668985	CNVD
Myelodysplastic syndrome	21251322	CNVD
Autism	22495311	CNVD
Hepatocellular carcinoma	18803288	CNVD
Breast cancer	21364760	CNVD
Prostate cancer	16573809	CNVD
Metanephric adenoma	20802469	CNVD
Developmental delay	21147756	CNVD
Myelofibrosis	22110671	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Pilocytic astrocytoma	18670637	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Melanoma	22183965	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Breast cancer	21611746	CNVD
Glycine encephalopathy	21572526	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Non-small cell lung cancer	19010865	CNVD
Myoepithelioma	18604193	CNVD
Glioblastoma multiforme	18628472	CNVD
Ovarian cancer	19835627	CNVD
Autism	20858261	CNVD
Epilepsy	20858261	CNVD
Mental retardation	20858261	CNVD

Chromatin state (count:427 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:15447000-15509800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr9:15460800-15510000	Weak transcription	Esophagus	oesophagus
3	chr9:15476600-15510000	Weak transcription	Sigmoid Colon	Sigmoid Colon
4	chr9:15477000-15509600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr9:15481600-15509600	Weak transcription	Aorta	Aorta
6	chr9:15485800-15509800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
7	chr9:15492600-15509800	Weak transcription	Colonic Mucosa	Colon
8	chr9:15493000-15509800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
9	chr9:15493000-15510000	Weak transcription	Gastric	stomach
10	chr9:15493000-15510000	Weak transcription	Lung	lung
11	chr9:15493000-15510000	Weak transcription	Pancreas	Pancrea
12	chr9:15493000-15510000	Weak transcription	Spleen	Spleen
13	chr9:15493200-15509600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
14	chr9:15493400-15510000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr9:15494000-15510000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
16	chr9:15500400-15509800	Weak transcription	Psoas Muscle	Psoas
17	chr9:15500400-15510000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
18	chr9:15501000-15510000	Weak transcription	Stomach Mucosa	stomach
19	chr9:15506600-15509800	Weak transcription	Placenta	Placenta
20	chr9:15507400-15509600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
21	chr9:15507400-15510000	Weak transcription	Placenta Amnion	Placenta Amnion
22	chr9:15507600-15509600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
23	chr9:15507600-15509600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
24	chr9:15507600-15509600	Weak transcription	Liver	Liver
25	chr9:15507600-15510200	Transcr. at gene 5' and 3'	iPS-20b Cell Line	embryonic stem cell
26	chr9:15507800-15509800	Transcr. at gene 5' and 3'	HUES48 Cell Line	embryonic stem cell
27	chr9:15507800-15509800	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
28	chr9:15507800-15510000	Transcr. at gene 5' and 3'	HUES64 Cell Line	embryonic stem cell
29	chr9:15507800-15510000	Transcr. at gene 5' and 3'	iPS-18 Cell Line	embryonic stem cell
30	chr9:15508000-15510000	Weak transcription	Left Ventricle	heart
31	chr9:15508200-15509600	Weak transcription	Fetal Muscle Leg	muscle
32	chr9:15508200-15510000	Transcr. at gene 5' and 3'	H1 Cell Line	embryonic stem cell
33	chr9:15508200-15510200	Transcr. at gene 5' and 3'	Dnd41	blood
34	chr9:15508200-15511800	Active TSS	Brain Inferior Temporal Lobe	brain
35	chr9:15508400-15509600	Transcr. at gene 5' and 3'	Fetal Thymus	thymus
36	chr9:15508400-15509800	Transcr. at gene 5' and 3'	HUES6 Cell Line	embryonic stem cell
37	chr9:15508400-15511400	Active TSS	Brain Cingulate Gyrus	brain
38	chr9:15508600-15509600	Transcr. at gene 5' and 3'	ES-UCSF4 Cell Line	embryonic stem cell
39	chr9:15508600-15509600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
40	chr9:15508600-15509600	Flanking Active TSS	Thymus	Thymus
41	chr9:15508600-15509800	Weak transcription	Skeletal Muscle Male	skeletal muscle
42	chr9:15508600-15513200	Active TSS	H9 Cell Line	embryonic stem cell
43	chr9:15508800-15509600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
44	chr9:15508800-15509600	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
45	chr9:15508800-15509600	Enhancers	Duodenum Smooth Muscle	Duodenum
46	chr9:15508800-15509600	Enhancers	Rectal Smooth Muscle	rectum
47	chr9:15508800-15509600	Flanking Active TSS	Hela-S3	cervix
48	chr9:15508800-15509800	Enhancers	Primary B cells from peripheral blood	blood
49	chr9:15508800-15509800	Weak transcription	Fetal Intestine Large	intestine
50	chr9:15508800-15509800	Weak transcription	Fetal Muscle Trunk	muscle

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