Variant report

Variant	esv3502814
Chromosome Location	chr6:33581974-33586972
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:62)
CpG islands
(count:61)
Chromatin interactive
region (count:10)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:62 , 50 per page) page: 1 2

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CCNT2	chr6:33584824-33585044	K562	blood:	n/a	n/a
2	CEBPB	chr6:33584793-33584995	HepG2	liver:	n/a	chr6:33584857-33584868
3	CEBPB	chr6:33584639-33585116	Hela-S3	cervix:	n/a	chr6:33584857-33584868
4	CEBPB	chr6:33584686-33585068	K562	blood:	n/a	chr6:33584857-33584868
5	CEBPB	chr6:33584733-33585105	K562	blood:	n/a	chr6:33584857-33584868
6	CEBPB	chr6:33584690-33585038	IMR90	lung:	n/a	chr6:33584857-33584868
7	CEBPB	chr6:33584744-33584990	K562	blood:	n/a	chr6:33584857-33584868
8	CEBPB	chr6:33584758-33584987	A549	lung:	n/a	chr6:33584857-33584868
9	CEBPD	chr6:33584739-33585205	K562	blood:	n/a	n/a
10	CTCF	chr6:33586920-33587070	HRE	kidney:	n/a	n/a
11	CTCF	chr6:33586720-33586870	GM12872	blood:	n/a	n/a
12	CTCF	chr6:33586920-33587070	GM12869	blood:	n/a	n/a
13	EP300	chr6:33584772-33585061	K562	blood:	n/a	n/a
14	EP300	chr6:33584641-33585103	Hela-S3	cervix:	n/a	n/a
15	FOS	chr6:33585873-33586305	HUVEC	blood vessel:	n/a	n/a
16	FOS	chr6:33584729-33585040	MCF10A-Er-Src	breast:	n/a	n/a
17	FOS	chr6:33584690-33584993	MCF10A-Er-Src	breast:	n/a	n/a
18	FOS	chr6:33584780-33584980	MCF10A-Er-Src	breast:	n/a	n/a
19	FOS	chr6:33584686-33585060	MCF10A-Er-Src	breast:	n/a	n/a
20	GATA1	chr6:33584730-33585206	K562	blood:	n/a	n/a
21	GATA1	chr6:33584741-33585211	PBDE	blood:	n/a	n/a
22	GATA2	chr6:33584720-33585040	K562	blood:	n/a	n/a
23	GATA2	chr6:33584705-33585012	K562	blood:	n/a	n/a
24	GTF2F1	chr6:33581524-33582092	Hela-S3	cervix:	n/a	n/a
25	MAX	chr6:33584677-33585047	Hela-S3	cervix:	n/a	n/a
26	MAX	chr6:33580942-33582155	HCT-116	colon:	n/a	chr6:33581098-33581108
27	MAX	chr6:33586784-33587256	K562	blood:	n/a	n/a
28	MAX	chr6:33580899-33582059	HepG2	liver:	n/a	chr6:33581098-33581108
29	MAX	chr6:33581140-33582010	Hela-S3	cervix:	n/a	n/a
30	MAZ	chr6:33581562-33582063	Hela-S3	cervix:	n/a	n/a
31	MXI1	chr6:33584718-33585001	Hela-S3	cervix:	n/a	n/a
32	MXI1	chr6:33581268-33582051	Hela-S3	cervix:	n/a	n/a
33	MYC	chr6:33586085-33586177	HUVEC	blood vessel:	n/a	n/a
34	MYC	chr6:33584798-33584829	MCF10A-Er-Src	breast:	n/a	n/a
35	MYC	chr6:33584735-33584964	MCF10A-Er-Src	breast:	n/a	n/a
36	MYC	chr6:33586595-33586627	HepG2	liver:	n/a	n/a
37	NR2F2	chr6:33584697-33585112	K562	blood:	n/a	n/a
38	POLR2A	chr6:33581163-33582215	U87	brain:	n/a	n/a
39	POLR2A	chr6:33584488-33584536	GM12878	blood:	n/a	n/a
40	POLR2A	chr6:33581593-33581997	HUVEC	blood vessel:	n/a	n/a
41	POLR2A	chr6:33581368-33582048	Hela-S3	cervix:	n/a	n/a
42	POLR2A	chr6:33581396-33582018	Hela-S3	cervix:	n/a	n/a
43	POLR2A	chr6:33581249-33582185	U87	brain:	n/a	n/a
44	POLR2A	chr6:33584485-33584724	HepG2	liver:	n/a	n/a
45	POLR2A	chr6:33584771-33585021	Hela-S3	cervix:	n/a	n/a
46	RAD21	chr6:33584733-33585028	Hela-S3	cervix:	n/a	n/a
47	RCOR1	chr6:33584737-33585028	Hela-S3	cervix:	n/a	n/a
48	RCOR1	chr6:33584754-33585093	K562	blood:	n/a	n/a
49	RCOR1	chr6:33581568-33582001	Hela-S3	cervix:	n/a	n/a
50	RCOR1	chr6:33580930-33582089	IMR90	lung:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:33585071-33585121	NB4	blood:	n/a
2	chr6:33585071-33585121	GM12891	blood:	n/a
3	chr6:33585071-33585121	NT2-D1	testis:	n/a
4	chr6:33585071-33585121	NHDF-neo	bronchial:	n/a
5	chr6:33585071-33585121	Hepatocyte	liver:	n/a
6	chr6:33585071-33585121	HCM	heart:	n/a
7	chr6:33585071-33585121	GM19239	blood:	n/a
8	chr6:33585071-33585121	HIPEpiC	eye:	n/a
9	chr6:33585071-33585121	Caco-2	colon:	n/a
10	chr6:33585071-33585121	H1-hESC	embryonic stem cell:	embryo
11	chr6:33585071-33585121	HepG2	liver:	n/a
12	chr6:33585071-33585121	HRPEpiC	eye:	n/a
13	chr6:33585071-33585121	HEEpiC	esophagus:	n/a
14	chr6:33585071-33585121	HL-60	blood:	n/a
15	chr6:33585071-33585121	PANC-1	pancreas:	n/a
16	chr6:33585071-33585121	PrEC	prostate:	n/a
17	chr6:33585071-33585121	HCF	heart:	n/a
18	chr6:33585071-33585121	Hela-S3	cervix:	n/a
19	chr6:33585071-33585121	ProgFib	skin:	n/a
20	chr6:33585071-33585121	HPAEpiC	pulmonary alveolar:	n/a
21	chr6:33585071-33585121	AG10803	skin:	n/a
22	chr6:33585071-33585121	HEK293	kidney:	embryo
23	chr6:33585071-33585121	HRCEpiC	kidney:	n/a
24	chr6:33585071-33585121	MCF-7	breast:	n/a
25	chr6:33585071-33585121	NH-A	brain:	n/a
26	chr6:33585071-33585121	HCT-116	colon:	n/a
27	chr6:33585071-33585121	HRE	kidney:	n/a
28	chr6:33585071-33585121	ECC-1	luminal epithelium:	n/a
29	chr6:33585071-33585121	T-47D	breast:	n/a
30	chr6:33585071-33585121	AG04449	skin:	fetal
31	chr6:33585071-33585121	HAEpiC	amniotic membrane:	n/a
32	chr6:33585071-33585121	HMEC	breast:	n/a
33	chr6:33585071-33585121	U87	brain:	n/a
34	chr6:33585071-33585121	SK-N-SH	brain:	n/a
35	chr6:33585071-33585121	SKMC	muscle:	n/a
36	chr6:33585071-33585121	NHBE	bronchial:	n/a
37	chr6:33585071-33585121	HNPCEpiC	eye:	n/a
38	chr6:33585071-33585121	LNCaP	prostate:	n/a
39	chr6:33585071-33585121	AG09309	skin:	n/a
40	chr6:33585071-33585121	MCF10A-Er-Src	breast:	n/a
41	chr6:33585071-33585121	HCPEpiC	choroid plexus:	n/a
42	chr6:33585071-33585121	GM12878	blood:	n/a
43	chr6:33585071-33585121	BJ	skin:	n/a
44	chr6:33585071-33585121	GM12892	blood:	n/a
45	chr6:33585071-33585121	SAEC	small airway:	n/a
46	chr6:33585071-33585121	AG04450	lung:	fetal
47	chr6:33585071-33585121	IMR90	lung:	fetal
48	chr6:33585071-33585121	SK-N-MC	brain:	n/a
49	chr6:33585071-33585121	CMK	blood:	n/a
50	chr6:33585071-33585121	SK-N-SH_RA	brain:	n/a

(count:10 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:33574216..33577618-chr6:33579266..33582393,4	MCF-7	breast:
2	chr17:56735246..56737826-chr6:33586590..33589099,2	MCF-7	breast:
3	chr6:33386588..33389201-chr6:33584352..33586241,2	MCF-7	breast:
4	chr6:33576666..33582891-chr6:33586745..33591603,10	MCF-7	breast:
5	chr6:33557568..33558267-chr6:33586070..33586956,2	MCF-7	breast:
6	chr6:33584326..33585911-chr6:33588780..33590574,2	K562	blood:
7	chr6:33581288..33583329-chr6:33600315..33602072,2	K562	blood:
8	chr6:33550022..33555745-chr6:33586647..33590467,5	MCF-7	breast:
9	chr6:33582787..33585683-chr6:33587089..33588741,2	K562	blood:
10	chr6:33577318..33579921-chr6:33582665..33584246,2	K562	blood:

No data

Variant related genes	Relation type
ITPR3	TF binding region
ITPR3	CpG island
ENSG00000197283	chromatin interactions
ENSG00000204188	chromatin interactions
ENSG00000202077	chromatin interactions
ENSG00000096433	chromatin interactions

Extended variants
information (count: 174 )
Associated
traits (count: 109 )

Variant overlapped rSNPs/rCNVs (count:174 , 50 per page) page: 1 2 3 4

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs499384	chr6:33582090-33582091	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs551712582	chr6:33582125-33582126	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs566744185	chr6:33582128-33582129	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs534674194	chr6:33582148-33582149	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs375263427	chr6:33582157-33582158	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs534017890	chr6:33582165-33582166	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs368175269	chr6:33582188-33582189	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs560409029	chr6:33582212-33582213	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs115817049	chr6:33582227-33582228	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs567403792	chr6:33582230-33582231	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs150765013	chr6:33582280-33582281	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs560965079	chr6:33582283-33582284	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs9394157	chr6:33582307-33582308	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs375384902	chr6:33582319-33582320	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs188875202	chr6:33582344-33582345	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs386699978	chr6:33582392-33582393	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs115910243	chr6:33582393-33582394	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs138037582	chr6:33582507-33582508	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs566731319	chr6:33582521-33582522	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs543246321	chr6:33582544-33582545	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs561320189	chr6:33582609-33582610	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs576533935	chr6:33582616-33582617	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs377198145	chr6:33582618-33582619	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs10755682	chr6:33582666-33582667	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs200948573	chr6:33582671-33582672	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs398094089	chr6:33582680-33582681	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs190961477	chr6:33582703-33582704	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs565342904	chr6:33582726-33582727	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs549111937	chr6:33582740-33582741	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs532570407	chr6:33582775-33582776	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs371655899	chr6:33582813-33582814	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs547789686	chr6:33582833-33582834	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs560473442	chr6:33582845-33582846	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs527579783	chr6:33582864-33582865	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs114401668	chr6:33582871-33582872	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs112993262	chr6:33583024-33583025	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs7753829	chr6:33583039-33583040	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs149578542	chr6:33583086-33583087	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs7753712	chr6:33583113-33583114	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs538281703	chr6:33583116-33583117	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs553343833	chr6:33583166-33583167	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs572745457	chr6:33583180-33583181	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs577940306	chr6:33583267-33583268	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs538568710	chr6:33583314-33583315	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs576576410	chr6:33583384-33583385	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs544002677	chr6:33583389-33583390	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs565404213	chr6:33583421-33583422	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs7754218	chr6:33583446-33583447	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs182411527	chr6:33583447-33583448	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs559492995	chr6:33583461-33583462	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:109)

Disease	PMID	Source
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Melanoma	18172304	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Hepatocellular carcinoma	16750200	CNVD
Autism	22495311	CNVD
Cancer	16790693	CNVD
Cervical cancer	21062161	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Systemic lupus erythematosus	17503323	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Urothelial carcinoma	18382360	CNVD
Cancer	21183584	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Gastric cancer	17908304	CNVD
Metanephric adenoma	20802469	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Schizophrenia	19571808	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Neuroblastoma	16790693	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
abnormal development	18461090	CNVD
Breast cancer	16397240	CNVD
Retinoblastoma	22278416	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Systemic lupus erythematosus	20877625	CNVD
Cleidocranial dysplasia	18696259	CNVD
Holoprosencephaly	21359414	CNVD
Liposarcoma	21253554	CNVD
Uveal melanoma	20484589	CNVD
Fibroblasts	20926602	CNVD
Systemic lupus erythematosus	19279649	CNVD
Retinoblastoma	16790693	CNVD
Acute myocardial infarction	18032375	CNVD
Renal cell carcinoma	19150565	CNVD
Systemic lupus erythematosus	19591781	CNVD
Attention deficit hyperactivity disorder	19287146	CNVD
Autism	19287146	CNVD
Erythema nodosum in leprosy	19287146	CNVD
Henoch-schoenlein purpura	19287146	CNVD
Liver cirrhosis	19287146	CNVD
Systemic lupus erythematosus	19287146	CNVD
Autoimmune disease	19135723	CNVD
Congenital adrenal hyperplasia	18478071	CNVD
Systemic lupus erythematosus	19287147	CNVD
Osteosarcoma	16790693	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Cancer	22183965	CNVD
Melanoma	22183965	CNVD
Myelofibrosis	22110671	CNVD
Incontinentia Pigmenti	22033527	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Encephalopathy	20692195	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Lung cancer	18438408	CNVD
Glioblastoma multiforme	21138945	CNVD
Breast cancer	21364760	CNVD
Urothelial carcinoma	21177765	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
early-passage human iPS cells	21368824	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Schizophrenia	23813976	CNVD

Chromatin state (count:175 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:33574400-33583200	Enhancers	HMEC	breast
2	chr6:33574600-33582400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr6:33577400-33583000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr6:33578000-33587000	Weak transcription	Skeletal Muscle Female	skeletal muscle
5	chr6:33578800-33588000	Weak transcription	Gastric	stomach
6	chr6:33579000-33583800	Weak transcription	Right Ventricle	heart
7	chr6:33579200-33586600	Weak transcription	Fetal Lung	lung
8	chr6:33579200-33587000	Weak transcription	Pancreas	Pancrea
9	chr6:33579400-33587000	Weak transcription	H9 Cell Line	embryonic stem cell
10	chr6:33579400-33587000	Weak transcription	Right Atrium	heart
11	chr6:33579400-33588000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
12	chr6:33580000-33586800	Weak transcription	Rectal Mucosa Donor 31	rectum
13	chr6:33580000-33587600	Weak transcription	Brain Substantia Nigra	brain
14	chr6:33580800-33582400	Enhancers	Breast Myoepithelial Primary Cells	Breast
15	chr6:33580800-33582400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
16	chr6:33580800-33583000	Enhancers	NHDF-Ad	bronchial
17	chr6:33580800-33583400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr6:33581000-33582000	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
19	chr6:33581000-33582000	Enhancers	Esophagus	oesophagus
20	chr6:33581000-33582000	Enhancers	Fetal Intestine Small	intestine
21	chr6:33581000-33582000	Enhancers	Placenta Amnion	Placenta Amnion
22	chr6:33581000-33582000	Flanking Active TSS	HepG2	liver
23	chr6:33581000-33582000	Enhancers	NHLF	lung
24	chr6:33581000-33582000	Flanking Active TSS	Osteobl	bone
25	chr6:33581000-33582200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
26	chr6:33581000-33582200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
27	chr6:33581000-33582200	Enhancers	NH-A	brain
28	chr6:33581000-33582200	Enhancers	NHEK	skin
29	chr6:33581000-33582400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
30	chr6:33581000-33582400	Enhancers	Stomach Mucosa	stomach
31	chr6:33581000-33583000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
32	chr6:33581000-33583000	Enhancers	HSMMtube	muscle
33	chr6:33581200-33582200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
34	chr6:33581200-33582200	Flanking Active TSS	Muscle Satellite Cultured Cells	--
35	chr6:33581200-33582200	Flanking Active TSS	Hela-S3	cervix
36	chr6:33581200-33582200	Enhancers	HUVEC	blood vessel
37	chr6:33581400-33582000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
38	chr6:33581400-33582000	Enhancers	Placenta	Placenta
39	chr6:33581400-33582200	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
40	chr6:33581400-33582200	Enhancers	Fetal Intestine Large	intestine
41	chr6:33581400-33583000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
42	chr6:33581600-33582000	Enhancers	Colonic Mucosa	Colon
43	chr6:33581600-33582000	Enhancers	Left Ventricle	heart
44	chr6:33581600-33582000	Enhancers	Spleen	Spleen
45	chr6:33581600-33582200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
46	chr6:33581600-33588000	Weak transcription	Brain Anterior Caudate	brain
47	chr6:33581800-33582000	Flanking Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
48	chr6:33581800-33582000	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
49	chr6:33581800-33582000	Flanking Active TSS	HSMM	muscle
50	chr6:33581800-33582400	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links