Variant report

Variant	esv3523718
Chromosome Location	chr14:68601299-68605697
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:218)
CpG islands
(count:61)
Chromatin interactive
region (count:48)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:218 , 50 per page) page: 1 2 3 4 5

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr14:68604449-68604802	K562	blood:	n/a	n/a
2	ATF2	chr14:68604314-68604857	H1-hESC	embryonic stem cell:	n/a	n/a
3	ATF2	chr14:68604347-68604879	H1-hESC	embryonic stem cell:	n/a	n/a
4	ATF3	chr14:68604275-68604849	A549	lung:	n/a	n/a
5	BATF	chr14:68601746-68602094	GM12878	blood:	n/a	n/a
6	BCL3	chr14:68604243-68604981	A549	lung:	n/a	n/a
7	CBX3	chr14:68604206-68604989	HCT-116	colon:	n/a	n/a
8	CEBPB	chr14:68604336-68604810	IMR90	lung:	n/a	n/a
9	CEBPB	chr14:68604201-68604989	A549	lung:	n/a	n/a
10	CEBPB	chr14:68604316-68604941	Hela-S3	cervix:	n/a	n/a
11	CEBPB	chr14:68604283-68604782	A549	lung:	n/a	n/a
12	CHD2	chr14:68604414-68604843	Hela-S3	cervix:	n/a	n/a
13	CREB1	chr14:68604345-68604864	H1-hESC	embryonic stem cell:	n/a	n/a
14	CREB1	chr14:68604435-68604809	A549	lung:	n/a	n/a
15	CREB1	chr14:68604477-68604810	A549	lung:	n/a	n/a
16	CTCF	chr14:68604519-68604634	Kidney_OC	kidney:	n/a	n/a
17	E2F4	chr14:68604420-68604780	MCF10A-Er-Src	breast:	n/a	n/a
18	E2F4	chr14:68605040-68605277	MCF10A-Er-Src	breast:	n/a	n/a
19	EBF1	chr14:68604530-68604736	GM12878	blood:	n/a	chr14:68604622-68604633
20	EBF1	chr14:68601796-68602129	GM12878	blood:	n/a	n/a
21	ELF1	chr14:68604466-68604942	MCF-7	breast:	n/a	n/a
22	EP300	chr14:68601868-68602223	GM12878	blood:	n/a	n/a
23	EP300	chr14:68604102-68605051	A549	lung:	n/a	n/a
24	EP300	chr14:68604324-68604924	T-47D	breast:	n/a	n/a
25	EP300	chr14:68604404-68604839	Hela-S3	cervix:	n/a	n/a
26	EP300	chr14:68604245-68604923	ECC-1	luminal epithelium:	n/a	n/a
27	EP300	chr14:68604227-68604990	A549	lung:	n/a	n/a
28	EP300	chr14:68604333-68605075	T-47D	breast:	n/a	n/a
29	EP300	chr14:68604395-68604769	SK-N-SH_RA	brain:	n/a	n/a
30	EP300	chr14:68604223-68605044	SK-N-SH	brain:	n/a	n/a
31	EP300	chr14:68604398-68604779	SK-N-SH_RA	brain:	n/a	n/a
32	EP300	chr14:68604128-68605095	ECC-1	luminal epithelium:	n/a	n/a
33	ESR1	chr14:68604375-68604862	ECC-1	luminal epithelium:	n/a	n/a
34	ESR1	chr14:68604371-68604822	T-47D	breast:	n/a	n/a
35	ESR1	chr14:68604309-68604904	ECC-1	luminal epithelium:	n/a	n/a
36	ESR1	chr14:68604295-68604864	ECC-1	luminal epithelium:	n/a	n/a
37	FOS	chr14:68604328-68605174	MCF10A-Er-Src	breast:	n/a	n/a
38	FOS	chr14:68602395-68602427	MCF10A-Er-Src	breast:	n/a	n/a
39	FOS	chr14:68604239-68604965	MCF10A-Er-Src	breast:	n/a	n/a
40	FOS	chr14:68604301-68604848	MCF10A-Er-Src	breast:	n/a	n/a
41	FOS	chr14:68604341-68604895	MCF10A-Er-Src	breast:	n/a	n/a
42	FOSL1	chr14:68604228-68604967	HCT-116	colon:	n/a	n/a
43	FOSL2	chr14:68604351-68604816	A549	lung:	n/a	n/a
44	FOSL2	chr14:68604362-68604914	MCF-7	breast:	n/a	n/a
45	FOSL2	chr14:68604126-68605001	A549	lung:	n/a	n/a
46	FOSL2	chr14:68604247-68605011	SK-N-SH	brain:	n/a	n/a
47	FOXA1	chr14:68604377-68604920	T-47D	breast:	n/a	n/a
48	FOXA1	chr14:68604361-68604898	T-47D	breast:	n/a	n/a
49	FOXA2	chr14:68604352-68604820	A549	lung:	n/a	n/a
50	FOXM1	chr14:68604138-68604943	ECC-1	luminal epithelium:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr14:68604594-68604644	HepG2	liver:	n/a
2	chr14:68604594-68604644	SKMC	muscle:	n/a
3	chr14:68604594-68604644	HEK293	kidney:	embryo
4	chr14:68604594-68604644	ProgFib	skin:	n/a
5	chr14:68604594-68604644	AG09319	gingival:	n/a
6	chr14:68604594-68604644	NB4	blood:	n/a
7	chr14:68604594-68604644	HUVEC	blood vessel:	n/a
8	chr14:68604594-68604644	HCM	heart:	n/a
9	chr14:68604594-68604644	Caco-2	colon:	n/a
10	chr14:68604594-68604644	GM12878	blood:	n/a
11	chr14:68604594-68604644	HRE	kidney:	n/a
12	chr14:68604594-68604644	GM12892	blood:	n/a
13	chr14:68604594-68604644	HCF	heart:	n/a
14	chr14:68604594-68604644	SAEC	small airway:	n/a
15	chr14:68604594-68604644	Jurkat	blood:	n/a
16	chr14:68604594-68604644	GM06990	blood:	n/a
17	chr14:68604594-68604644	NH-A	brain:	n/a
18	chr14:68604594-68604644	HCPEpiC	choroid plexus:	n/a
19	chr14:68604594-68604644	MCF-7	breast:	n/a
20	chr14:68604594-68604644	HAEpiC	amniotic membrane:	n/a
21	chr14:68604594-68604644	HMEC	breast:	n/a
22	chr14:68604594-68604644	A549	lung:	n/a
23	chr14:68604594-68604644	AG09309	skin:	n/a
24	chr14:68604594-68604644	HNPCEpiC	eye:	n/a
25	chr14:68604594-68604644	HL-60	blood:	n/a
26	chr14:68604594-68604644	U87	brain:	n/a
27	chr14:68604594-68604644	HIPEpiC	eye:	n/a
28	chr14:68604594-68604644	HRPEpiC	eye:	n/a
29	chr14:68604594-68604644	SK-N-SH	brain:	n/a
30	chr14:68604594-68604644	PANC-1	pancreas:	n/a
31	chr14:68604594-68604644	ECC-1	luminal epithelium:	n/a
32	chr14:68604594-68604644	BJ	skin:	n/a
33	chr14:68604594-68604644	SK-N-SH_RA	brain:	n/a
34	chr14:68604594-68604644	Hepatocyte	liver:	n/a
35	chr14:68604594-68604644	ovcar-3	ovarian:	n/a
36	chr14:68604594-68604644	PFSK-1	brain:	n/a
37	chr14:68604594-68604644	GM19239	blood:	n/a
38	chr14:68604594-68604644	PrEC	prostate:	n/a
39	chr14:68604594-68604644	AG10803	skin:	n/a
40	chr14:68604594-68604644	LNCaP	prostate:	n/a
41	chr14:68604594-68604644	HCT-116	colon:	n/a
42	chr14:68604594-68604644	RPTEC	kidney:	n/a
43	chr14:68604594-68604644	SK-N-MC	brain:	n/a
44	chr14:68604594-68604644	AoSMC	blood vessel:	n/a
45	chr14:68604594-68604644	K562	blood:	n/a
46	chr14:68604594-68604644	GM12891	blood:	n/a
47	chr14:68604594-68604644	NHBE	bronchial:	n/a
48	chr14:68604594-68604644	NT2-D1	testis:	n/a
49	chr14:68604594-68604644	IMR90	lung:	fetal
50	chr14:68604594-68604644	NHDF-neo	bronchial:	n/a

(count:48 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr14:68588139..68594823-chr14:68601028..68606199,6	MCF-7	breast:
2	chr14:68569854..68573880-chr14:68602556..68607160,7	MCF-7	breast:
3	chr14:68546114..68557712-chr14:68603959..68613316,23	MCF-7	breast:
4	chr14:68605654..68608460-chr14:68861850..68864803,2	MCF-7	breast:
5	chr14:68604526..68606535-chr14:68626039..68628332,2	MCF-7	breast:
6	chr14:68605361..68607383-chr14:68924952..68927307,3	MCF-7	breast:
7	chr14:68601301..68602871-chr14:68607372..68610107,2	MCF-7	breast:
8	chr14:68508469..68511778-chr14:68605587..68608728,3	MCF-7	breast:
9	chr14:68604795..68607491-chr14:68924394..68928105,4	MCF-7	breast:
10	chr14:68602495..68610533-chr14:68655867..68660749,19	MCF-7	breast:
11	chr14:68604826..68607033-chr14:68746486..68749072,2	MCF-7	breast:
12	chr14:68603181..68605739-chr14:68855222..68857366,2	MCF-7	breast:
13	chr14:68601379..68608308-chr14:69256404..69263440,24	MCF-7	breast:
14	chr14:68604940..68608294-chr14:68678371..68680438,3	MCF-7	breast:
15	chr14:68604115..68608838-chr14:68697064..68703970,11	MCF-7	breast:
16	chr14:68602094..68605658-chr14:68697621..68700210,3	MCF-7	breast:
17	chr14:68605282..68608015-chr14:68828516..68831935,3	MCF-7	breast:
18	chr14:68405383..68414524-chr14:68603693..68608960,22	MCF-7	breast:
19	chr14:68605465..68608854-chr14:68724307..68725901,3	MCF-7	breast:
20	chr14:68604998..68610062-chr14:68640494..68644617,7	MCF-7	breast:
21	chr14:68602359..68604172-chr14:68607453..68609034,2	K562	blood:
22	chr14:68605640..68609689-chr14:68681508..68683618,3	MCF-7	breast:
23	chr14:68477430..68479378-chr14:68605604..68607535,2	MCF-7	breast:
24	chr14:68604794..68607877-chr14:68715482..68717811,3	MCF-7	breast:
25	chr14:68430411..68433270-chr14:68602747..68607900,7	MCF-7	breast:
26	chr14:68600662..68602278-chr14:69257760..69259773,2	MCF-7	breast:
27	chr14:68532345..68534667-chr14:68601779..68604351,2	MCF-7	breast:
28	chr14:68604727..68607514-chr14:68664007..68665710,2	MCF-7	breast:
29	chr14:68604554..68607336-chr14:68675149..68677760,3	MCF-7	breast:
30	chr14:68560697..68562735-chr14:68604921..68607630,2	MCF-7	breast:
31	chr14:68601506..68610081-chr14:68654290..68661321,21	MCF-7	breast:
32	chr14:68603253..68606404-chr14:68630681..68636382,6	MCF-7	breast:
33	chr14:68604513..68607685-chr14:69281847..69284792,3	MCF-7	breast:
34	chr14:68605260..68609256-chr14:68928539..68930539,3	MCF-7	breast:
35	chr14:68405207..68413374-chr14:68603625..68613921,22	MCF-7	breast:
36	chr14:68604670..68608287-chr14:68720771..68726254,6	MCF-7	breast:
37	chr14:68541688..68545482-chr14:68601842..68606347,5	MCF-7	breast:
38	chr14:68604504..68610375-chr14:68709920..68717829,10	MCF-7	breast:
39	chr14:68563027..68566553-chr14:68604012..68608205,4	MCF-7	breast:
40	chr14:68600338..68604507-chr14:69260783..69264203,4	MCF-7	breast:
41	chr14:68569098..68575378-chr14:68600721..68608879,10	MCF-7	breast:
42	chr14:68604553..68606506-chr14:68645240..68647824,2	MCF-7	breast:
43	chr14:68570562..68573394-chr14:68599517..68602198,2	MCF-7	breast:
44	chr14:68431210..68433040-chr14:68605467..68607589,3	MCF-7	breast:
45	chr14:68603270..68607294-chr14:68934008..68937330,4	MCF-7	breast:
46	chr14:68438169..68440796-chr14:68604712..68608303,3	MCF-7	breast:
47	chr14:68604583..68613347-chr14:69257128..69263457,24	MCF-7	breast:
48	chr14:68602556..68605498-chr14:68644856..68647677,2	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000258837	TF binding region
ENSG00000258837	CpG island
ENSG00000243546	chromatin interactions
ENSG00000185650	chromatin interactions

Extended variants
information (count: 156 )
Associated
traits (count: 64 )

Variant overlapped rSNPs/rCNVs (count:156 , 50 per page) page: 1 2 3 4

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs564395226	chr14:68601317-68601318	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
2	rs187280263	chr14:68601437-68601438	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs73288005	chr14:68601490-68601491	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs34758057	chr14:68601497-68601498	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs10134029	chr14:68601520-68601521	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs10134124	chr14:68601529-68601530	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs529587355	chr14:68601530-68601531	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs547670938	chr14:68601535-68601536	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs559551490	chr14:68601601-68601602	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs533337016	chr14:68601602-68601603	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs552266257	chr14:68601697-68601698	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs192045417	chr14:68601708-68601709	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs34842274	chr14:68601716-68601717	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs537851869	chr14:68601776-68601777	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs8012493	chr14:68601779-68601780	Weak transcription Enhancers	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs35843219	chr14:68601866-68601867	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs568053986	chr14:68601955-68601956	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs76200082	chr14:68601964-68601965	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs185240963	chr14:68601978-68601979	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs539202902	chr14:68601979-68601980	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs190484644	chr14:68602016-68602017	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs143195815	chr14:68602083-68602084	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs74901851	chr14:68602097-68602098	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs576410771	chr14:68602119-68602120	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs543892873	chr14:68602174-68602175	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs561784088	chr14:68602213-68602214	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs193102798	chr14:68602258-68602259	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs541349347	chr14:68602265-68602266	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs559586346	chr14:68602280-68602281	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs533584370	chr14:68602289-68602290	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs17105024	chr14:68602386-68602387	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs151238803	chr14:68602388-68602389	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs374775931	chr14:68602455-68602456	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs531347242	chr14:68602535-68602536	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs549886015	chr14:68602539-68602540	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs368110851	chr14:68602550-68602551	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs75578298	chr14:68602577-68602578	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs528865857	chr14:68602598-68602599	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs543449562	chr14:68602599-68602600	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs565793814	chr14:68602601-68602602	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs185840122	chr14:68602637-68602638	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs367764939	chr14:68602644-68602645	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs188085516	chr14:68602677-68602678	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs569820565	chr14:68602711-68602712	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs10149801	chr14:68602716-68602717	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs180936006	chr14:68602756-68602757	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs2588832	chr14:68602767-68602768	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs17105031	chr14:68602987-68602988	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs553633220	chr14:68603028-68603029	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs578221718	chr14:68603043-68603044	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:64)

Disease	PMID	Source
Esophageal cancer	21851588	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
High-proliferative meningiomas	17937814	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Non-small cell lung cancer	21044232	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Melanoma	18172304	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Medulloblastoma	21979893	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Hepatocellular carcinoma	22174799	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	17899364	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Renal cell carcinoma	21668985	CNVD
Chronic myeloid leukemia	20724749	CNVD
Wilms tumour	21544195	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Urothelial carcinoma	21177765	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
Colorectal cancer	16272173	CNVD
Lung cancer	18438408	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Breast cancer	22032731	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Colorectal cancer	16774939	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Ovarian cancer	21720365	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Neuroblastoma	18923191	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Barrett''s syndrome	19417022	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
small cell lung cancer	20016488	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Breast cancer	21364760	CNVD
Breast cancer	17133270	CNVD
Basal cell lymphoma	17053054	CNVD
cataract	16735990	CNVD
Neuroblastoma	20406844	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Hepatocellular carcinoma	16750200	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Cancer	20164919	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:236 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:68592200-68603000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr14:68592400-68602200	Weak transcription	Duodenum Smooth Muscle	Duodenum
3	chr14:68592400-68604600	Weak transcription	Psoas Muscle	Psoas
4	chr14:68592400-68606200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr14:68593400-68602000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr14:68593400-68603400	Weak transcription	Placenta Amnion	Placenta Amnion
7	chr14:68594200-68604400	Weak transcription	Fetal Stomach	stomach
8	chr14:68596200-68604800	Weak transcription	Primary hematopoietic stem cells	blood
9	chr14:68598800-68603800	Weak transcription	Adipose Nuclei	Adipose
10	chr14:68599000-68601800	Weak transcription	Fetal Kidney	kidney
11	chr14:68599000-68602000	Weak transcription	Osteobl	bone
12	chr14:68599000-68602200	Weak transcription	NH-A	brain
13	chr14:68599400-68601800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
14	chr14:68599400-68601800	Weak transcription	Rectal Smooth Muscle	rectum
15	chr14:68599600-68602000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
16	chr14:68599600-68603600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
17	chr14:68599600-68603800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
18	chr14:68599800-68601800	Weak transcription	A549	lung
19	chr14:68599800-68603000	Weak transcription	Fetal Muscle Leg	muscle
20	chr14:68599800-68604400	Weak transcription	Ovary	ovary
21	chr14:68600000-68601800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr14:68600000-68601800	Weak transcription	Colon Smooth Muscle	Colon
23	chr14:68600000-68604200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
24	chr14:68600000-68606200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
25	chr14:68600200-68601800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
26	chr14:68600800-68601800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
27	chr14:68601000-68601800	Enhancers	Primary T regulatory cells fromperipheralblood	blood
28	chr14:68601000-68602000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
29	chr14:68601200-68606400	Weak transcription	Brain Hippocampus Middle	brain
30	chr14:68601400-68602400	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
31	chr14:68601400-68604400	Weak transcription	Rectal Mucosa Donor 31	rectum
32	chr14:68601800-68602000	Enhancers	NHEK	skin
33	chr14:68601800-68602200	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
34	chr14:68601800-68602200	Enhancers	HSMM	muscle
35	chr14:68601800-68602400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
36	chr14:68601800-68602400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
37	chr14:68601800-68602400	Enhancers	Fetal Kidney	kidney
38	chr14:68601800-68602400	Enhancers	Rectal Smooth Muscle	rectum
39	chr14:68601800-68602400	Enhancers	GM12878-XiMat	blood
40	chr14:68601800-68602600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
41	chr14:68601800-68602600	Enhancers	Colon Smooth Muscle	Colon
42	chr14:68601800-68602600	ZNF genes & repeats	A549	lung
43	chr14:68601800-68602600	Enhancers	NHLF	lung
44	chr14:68601800-68603200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
45	chr14:68601800-68604200	Enhancers	Muscle Satellite Cultured Cells	--
46	chr14:68601800-68607200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
47	chr14:68601800-68608800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
48	chr14:68601800-68613600	Enhancers	Breast Myoepithelial Primary Cells	Breast
49	chr14:68601800-68614400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
50	chr14:68601800-68614800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links