Variant report

Variant	nsv10808
Chromosome Location	chr6:29648051-29653183
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr6:29648289-29648361	MCF-7	breast:	n/a	chr6:29648349-29648358
2	CTCF	chr6:29648320-29648470	RPTEC	kidney:	n/a	chr6:29648349-29648358
3	CTCF	chr6:29648365-29648366	GM19238	blood:	n/a	n/a
4	CTCF	chr6:29648320-29648470	GM12875	blood:	n/a	chr6:29648349-29648358
5	CTCF	chr6:29648340-29648490	GM12878	blood:	n/a	chr6:29648349-29648358
6	CTCF	chr6:29648280-29648430	WERI-Rb-1	eye:	n/a	chr6:29648349-29648358
7	CTCF	chr6:29648320-29648470	NHEK	skin:	n/a	chr6:29648349-29648358
8	CTCF	chr6:29648180-29648330	GM12867	blood:	n/a	n/a
9	CTCF	chr6:29648260-29648410	NB4	blood:	n/a	chr6:29648349-29648358
10	CTCF	chr6:29648353-29648362	GM19238	blood:	n/a	n/a
11	CTCF	chr6:29648320-29648470	HepG2	liver:	n/a	chr6:29648349-29648358
12	CTCF	chr6:29648280-29648430	HBMEC	blood vessel:	n/a	chr6:29648349-29648358
13	CTCF	chr6:29648260-29648410	HEK293	kidney:	n/a	chr6:29648349-29648358
14	CTCF	chr6:29648280-29648430	HMEC	breast:	n/a	chr6:29648349-29648358
15	CTCF	chr6:29648280-29648430	GM12871	blood:	n/a	chr6:29648349-29648358
16	CTCF	chr6:29648320-29648470	MCF-7	breast:	n/a	chr6:29648349-29648358
17	CTCF	chr6:29648306-29648401	MCF-7	breast:	n/a	chr6:29648349-29648358
18	CTCF	chr6:29648270-29648444	H1-hESC	embryonic stem cell:	n/a	chr6:29648349-29648358
19	CTCF	chr6:29648176-29648470	H1-hESC	embryonic stem cell:	n/a	chr6:29648349-29648358
20	CTCF	chr6:29648320-29648470	HEK293	kidney:	n/a	chr6:29648349-29648358
21	CTCF	chr6:29648280-29648430	HCM	heart:	n/a	chr6:29648349-29648358
22	CTCF	chr6:29648300-29648450	GM12871	blood:	n/a	chr6:29648349-29648358
23	CTCF	chr6:29648500-29648650	GM12867	blood:	n/a	n/a
24	CTCF	chr6:29648237-29648432	GM12891	blood:	n/a	chr6:29648349-29648358
25	CTCF	chr6:29648260-29648410	GM12873	blood:	n/a	chr6:29648349-29648358
26	CTCF	chr6:29648260-29648410	GM12868	blood:	n/a	chr6:29648349-29648358
27	CTCFL	chr6:29648265-29648412	K562	blood:	n/a	n/a
28	EGR1	chr6:29649471-29649637	K562	blood:	n/a	n/a
29	JUND	chr6:29648027-29648062	K562	blood:	n/a	n/a
30	KAP1	chr6:29652419-29652949	HEK293	kidney:	n/a	n/a
31	MAX	chr6:29648039-29648281	K562	blood:	n/a	chr6:29648221-29648230 chr6:29648220-29648231
32	MXI1	chr6:29653166-29653237	H1-hESC	embryonic stem cell:	n/a	n/a
33	MYC	chr6:29647770-29648099	MCF10A-Er-Src	breast:	n/a	n/a
34	POLR2A	chr6:29648760-29648997	GM12891	blood:	n/a	n/a
35	POLR2A	chr6:29648091-29648540	GM12891	blood:	n/a	n/a
36	POLR2A	chr6:29648641-29649018	GM12891	blood:	n/a	n/a
37	POLR2A	chr6:29648195-29649120	GM18951	blood:	n/a	n/a
38	POLR2A	chr6:29648782-29648955	GM12878	blood:	n/a	n/a
39	POLR2A	chr6:29647749-29649223	GM12891	blood:	n/a	n/a
40	POLR2A	chr6:29648334-29648564	GM12891	blood:	n/a	n/a
41	REST	chr6:29652538-29652828	H1-hESC	embryonic stem cell:	n/a	n/a
42	REST	chr6:29652436-29652916	PFSK-1	brain:	n/a	n/a
43	REST	chr6:29652593-29652789	Hela-S3	cervix:	n/a	n/a
44	REST	chr6:29652599-29652758	H1-hESC	embryonic stem cell:	n/a	n/a
45	REST	chr6:29652574-29652767	K562	blood:	n/a	n/a
46	SETDB1	chr6:29652809-29653113	U2OS	brain:	n/a	n/a
47	TAF1	chr6:29648154-29648378	GM12891	blood:	n/a	n/a
48	TCF7L2	chr6:29652627-29653055	HEK293	kidney:	n/a	n/a
49	USF2	chr6:29648232-29648272	H1-hESC	embryonic stem cell:	n/a	n/a
50	YY1	chr6:29647863-29648474	GM12891	blood:	n/a	chr6:29648056-29648066 chr6:29648059-29648067 chr6:29648251-29648259

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:29648271-29648321	PFSK-1	brain:	n/a
2	chr6:29649092-29649142	HPAEpiC	pulmonary alveolar:	n/a
3	chr6:29648468-29648518	BJ	skin:	n/a
4	chr6:29648400-29648450	Hela-S3	cervix:	n/a
5	chr6:29648348-29648398	HUVEC	blood vessel:	n/a
6	chr6:29648271-29648321	PFSK-1	brain:	n/a
7	chr6:29649092-29649142	HPAEpiC	pulmonary alveolar:	n/a
8	chr6:29648468-29648518	BJ	skin:	n/a
9	chr6:29648400-29648450	Hela-S3	cervix:	n/a
10	chr6:29648348-29648398	HUVEC	blood vessel:	n/a
11	chr6:29648348-29648398	MCF-7	breast:	n/a
12	chr6:29648379-29648429	SK-N-MC	brain:	n/a
13	chr6:29648564-29648614	SAEC	small airway:	n/a
14	chr6:29648604-29648654	HEK293	kidney:	embryo
15	chr6:29648381-29648431	GM19239	blood:	n/a
16	chr6:29648756-29648806	NT2-D1	testis:	n/a
17	chr6:29649024-29649074	GM12891	blood:	n/a
18	chr6:29649084-29649134	SKMC	muscle:	n/a
19	chr6:29648275-29648325	AG04450	lung:	fetal
20	chr6:29648345-29648395	HCPEpiC	choroid plexus:	n/a
21	chr6:29648736-29648786	SK-N-SH	brain:	n/a
22	chr6:29648275-29648325	GM12892	blood:	n/a
23	chr6:29648275-29648325	T-47D	breast:	n/a
24	chr6:29649084-29649134	MCF10A-Er-Src	breast:	n/a
25	chr6:29649807-29649857	Hela-S3	cervix:	n/a
26	chr6:29648736-29648786	Jurkat	blood:	n/a
27	chr6:29648400-29648450	H1-hESC	embryonic stem cell:	embryo
28	chr6:29648400-29648450	GM12878	blood:	n/a
29	chr6:29648564-29648614	LNCaP	prostate:	n/a
30	chr6:29648271-29648321	T-47D	breast:	n/a
31	chr6:29648468-29648518	ProgFib	skin:	n/a
32	chr6:29649807-29649857	HIPEpiC	eye:	n/a
33	chr6:29648225-29648275	HIPEpiC	eye:	n/a
34	chr6:29648275-29648325	HRCEpiC	kidney:	n/a
35	chr6:29648468-29648518	NHDF-neo	bronchial:	n/a
36	chr6:29648381-29648431	SK-N-MC	brain:	n/a
37	chr6:29648628-29648678	HL-60	blood:	n/a
38	chr6:29648225-29648275	AG10803	skin:	n/a
39	chr6:29649807-29649857	CMK	blood:	n/a
40	chr6:29648452-29648502	SK-N-MC	brain:	n/a
41	chr6:29648628-29648678	SKMC	muscle:	n/a
42	chr6:29648628-29648678	Hepatocyte	liver:	n/a
43	chr6:29648275-29648325	AG09309	skin:	n/a
44	chr6:29648507-29648557	GM12878	blood:	n/a
45	chr6:29648400-29648450	BE2_C	brain:	n/a
46	chr6:29648525-29648575	AG09309	skin:	n/a
47	chr6:29648379-29648429	PANC-1	pancreas:	n/a
48	chr6:29648901-29648951	PrEC	prostate:	n/a
49	chr6:29648379-29648429	AG09309	skin:	n/a
50	chr6:29648452-29648502	HCF	heart:	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:29637497..29639601-chr6:29651008..29653048,2	K562	blood:
2	chr6:29619162..29620164-chr6:29653167..29654163,5	MCF-7	breast:

Variant related genes	Relation type
ZFP57	TF binding region
ZFP57	CpG island
ENSG00000204655	chromatin interactions

Extended variants
information (count: 212 )
Associated
traits (count: 107 )

Variant overlapped rSNPs/rCNVs (count:212 , 50 per page) page: 1 2 3 4 5

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs578139433	chr6:29648055-29648056	Weak transcription Enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
2	rs534644284	chr6:29648056-29648057	Weak transcription Enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
3	rs2747427	chr6:29648119-29648120	Weak transcription Enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
4	rs17184549	chr6:29648120-29648121	Weak transcription Enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
5	rs2747428	chr6:29648126-29648127	Weak transcription Enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
6	rs559410412	chr6:29648136-29648137	Weak transcription Enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
7	rs417764	chr6:29648137-29648138	Weak transcription Enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
8	rs551533977	chr6:29648198-29648199	Weak transcription Enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
9	rs3129058	chr6:29648199-29648200	Weak transcription Enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer	TF binding region CpG island	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
10	rs530752536	chr6:29648226-29648227	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
11	rs550563581	chr6:29648231-29648232	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
12	rs115687047	chr6:29648290-29648291	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
13	rs2747429	chr6:29648377-29648378	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
14	rs143550378	chr6:29648382-29648383	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
15	rs365052	chr6:29648398-29648399	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
16	rs558633480	chr6:29648413-29648414	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
17	rs3129057	chr6:29648468-29648469	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers	TF binding region CpG island	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
18	rs114013701	chr6:29648490-29648491	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
19	rs2747430	chr6:29648506-29648507	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers	TF binding region CpG island	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
20	rs141767002	chr6:29648535-29648536	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
21	rs2747431	chr6:29648564-29648565	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers	TF binding region CpG island	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
22	rs559352155	chr6:29648585-29648586	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
23	rs114184656	chr6:29648613-29648614	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
24	rs545141163	chr6:29648693-29648694	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
25	rs565391168	chr6:29648695-29648696	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
26	rs549128527	chr6:29648718-29648719	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
27	rs556492184	chr6:29648731-29648732	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
28	rs550798696	chr6:29648738-29648739	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
29	rs369674623	chr6:29648756-29648757	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
30	rs146035947	chr6:29648772-29648773	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
31	rs416560	chr6:29648785-29648786	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers	TF binding region CpG island	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs566440357	chr6:29648828-29648829	Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
33	rs538637425	chr6:29648845-29648846	Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
34	rs377436452	chr6:29648919-29648920	Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
35	rs113395474	chr6:29648930-29648931	Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
36	rs62392956	chr6:29648934-29648935	Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS	TF binding region CpG island	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
37	rs560813388	chr6:29648991-29648992	Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
38	rs9280643	chr6:29648995-29648996	Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
39	rs189997081	chr6:29649008-29649009	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
40	rs115918329	chr6:29649010-29649011	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
41	rs553270175	chr6:29649015-29649016	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
42	rs572863292	chr6:29649019-29649020	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
43	rs112470363	chr6:29649049-29649050	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
44	rs375017247	chr6:29649051-29649052	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
45	rs3129054	chr6:29649056-29649057	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS	TF binding region CpG island	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
46	rs3131848	chr6:29649093-29649094	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS	TF binding region CpG island	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
47	rs3131847	chr6:29649105-29649106	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS	TF binding region CpG island	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
48	rs141924551	chr6:29649152-29649153	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
49	rs140943716	chr6:29649158-29649159	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
50	rs9500954	chr6:29649175-29649176	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:107)

Disease	PMID	Source
Acute lymphoblastic leukemia	22237106	CNVD
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
Lung cancer	18438408	CNVD
Ewing''s sarcoma	17952124	CNVD
Gastric cancer	16891809	CNVD
Ovarian cancer	21781307	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Autism	21448237	CNVD
Cancer	20164919	CNVD
Melanoma	18172304	CNVD
Breast cancer	22844521	CNVD
HIV/AIDS	22844521	CNVD
Ovarian cancer	22844521	CNVD
Prostate cancer	22844521	CNVD
Psoriasis	22844521	CNVD
Rheumatoid arthritis	22844521	CNVD
Sclerosis systemic	22844521	CNVD
Systemic lupus erythematosus	22844521	CNVD
Breast cancer	22522925	CNVD
Breast cancer	21552322	CNVD
Immune disease	21076436	CNVD
Autoimmune disease	19135723	CNVD
Systemic lupus erythematosus	17953491	CNVD
Recurrent Infections	22737222	CNVD
Systemic lupus erythematosus	21904924	CNVD
Ependymoma	19289631	CNVD
Gestational infection	22844521	CNVD
Head circumference	22844521	CNVD
Infertility	22844521	CNVD
Recurrent birth weight diabetes	22844521	CNVD
Obesity	22844521	CNVD
Recurrent pregnancy loss	22844521	CNVD
Intellectual disability	21811512	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Congenital anomalies of the kidney and urinary tract	18694510	CNVD
Nasopharyngeal cancer	22815911	CNVD
Hepatocellular carcinoma	16750200	CNVD
Basal cell lymphoma	21115979	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	17133270	CNVD
Autism	22495311	CNVD
Cancer	16790693	CNVD
Breast cancer	22032731	CNVD
Cervical cancer	21062161	CNVD
Breast cancer	21785460	CNVD
Retinoblastoma	16790693	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Systemic lupus erythematosus	17503323	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
T-cell lymphomas	19863542	CNVD
Urothelial carcinoma	18382360	CNVD
Cancer	21183584	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
Renal cell carcinoma	18765545	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Gastric cancer	17908304	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16397240	CNVD
Metanephric adenoma	20802469	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	21364760	CNVD
Schizophrenia	19571809	CNVD
Schizophrenia	19571808	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Neuroblastoma	16790693	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
abnormal development	18461090	CNVD
Breast cancer	21509527	CNVD
Melanoma	17363583	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:100 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:29625000-29663600	Weak transcription	Right Atrium	heart
2	chr6:29643000-29648800	Enhancers	HMEC	breast
3	chr6:29643200-29648400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr6:29643400-29648400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr6:29645200-29648200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
6	chr6:29645200-29648400	Weak transcription	Primary hematopoietic stem cells	blood
7	chr6:29645800-29648200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr6:29646000-29648400	Flanking Active TSS	NHEK	skin
9	chr6:29646000-29648800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr6:29646000-29651400	Weak transcription	HUES6 Cell Line	embryonic stem cell
11	chr6:29646200-29651400	Weak transcription	HUES64 Cell Line	embryonic stem cell
12	chr6:29646200-29651400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
13	chr6:29646400-29648400	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr6:29646800-29651400	Weak transcription	H1 Cell Line	embryonic stem cell
15	chr6:29647000-29649600	Weak transcription	Spleen	Spleen
16	chr6:29647000-29651400	Weak transcription	H9 Cell Line	embryonic stem cell
17	chr6:29647000-29651400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
18	chr6:29647400-29648200	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
19	chr6:29647400-29651600	Weak transcription	HUES48 Cell Line	embryonic stem cell
20	chr6:29647600-29649200	Active TSS	Fetal Heart	heart
21	chr6:29647800-29648200	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
22	chr6:29647800-29648800	Flanking Bivalent TSS/Enh	Placenta	Placenta
23	chr6:29647800-29649000	Bivalent/Poised TSS	Colonic Mucosa	Colon
24	chr6:29648000-29648200	Enhancers	iPS-20b Cell Line	embryonic stem cell
25	chr6:29648000-29648200	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Male	--
26	chr6:29648000-29648200	Active TSS	Rectal Mucosa Donor 29	rectum
27	chr6:29648000-29648200	Bivalent Enhancer	K562	blood
28	chr6:29648000-29648600	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
29	chr6:29648000-29648800	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
30	chr6:29648000-29648800	Bivalent/Poised TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
31	chr6:29648000-29649200	ZNF genes & repeats	Primary monocytes fromperipheralblood	blood
32	chr6:29648000-29649200	Bivalent/Poised TSS	Primary T cells fromperipheralblood	blood
33	chr6:29648000-29651400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
34	chr6:29648200-29648400	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
35	chr6:29648200-29648400	Bivalent/Poised TSS	Primary B cells from peripheral blood	blood
36	chr6:29648200-29648600	Bivalent/Poised TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
37	chr6:29648200-29648600	Flanking Bivalent TSS/Enh	K562	blood
38	chr6:29648200-29648600	Bivalent/Poised TSS	Monocytes-CD14+_RO01746	blood
39	chr6:29648200-29648800	Bivalent Enhancer	Skeletal Muscle Female	skeletal muscle
40	chr6:29648200-29649000	Active TSS	Breast Myoepithelial Primary Cells	Breast
41	chr6:29648200-29649000	Bivalent Enhancer	Primary neutrophils fromperipheralblood	blood
42	chr6:29648200-29649000	Active TSS	Primary Natural Killer cells fromperipheralblood	blood
43	chr6:29648200-29649000	Bivalent/Poised TSS	Foreskin Melanocyte Primary Cells skin01	Skin
44	chr6:29648200-29649200	Bivalent/Poised TSS	Rectal Mucosa Donor 29	rectum
45	chr6:29648200-29651400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
46	chr6:29648400-29648600	Active TSS	Primary hematopoietic stem cells	blood
47	chr6:29648400-29648600	Bivalent/Poised TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
48	chr6:29648400-29648600	Bivalent/Poised TSS	Adipose Nuclei	Adipose
49	chr6:29648400-29648800	Active TSS	Primary B cells from peripheral blood	blood
50	chr6:29648400-29648800	ZNF genes & repeats	Foreskin Keratinocyte Primary Cells skin02	Skin

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