Variant report

Variant nsv510577
Chromosome Location chr13:30213612-30254316
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:162 , 50 per page) page: 1 2 3 4
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:30214600-30215000 Enhancers Rectal Mucosa Donor 31 rectum
2 chr13:30214800-30215600 Enhancers HUVEC blood vessel
3 chr13:30220800-30226800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr13:30221600-30222000 Active TSS HUES48 Cell Line embryonic stem cell
5 chr13:30221600-30222000 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
6 chr13:30221600-30222000 Active TSS Primary T cells from cord blood blood
7 chr13:30221600-30222200 Active TSS H1 Cell Line embryonic stem cell
8 chr13:30221600-30222400 Active TSS HUES6 Cell Line embryonic stem cell
9 chr13:30221600-30222400 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
10 chr13:30221600-30222600 Active TSS iPS-20b Cell Line embryonic stem cell
11 chr13:30221600-30222800 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr13:30221600-30222800 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr13:30221800-30222000 Bivalent/Poised TSS HUVEC blood vessel
14 chr13:30221800-30222200 Active TSS iPS-15b Cell Line embryonic stem cell
15 chr13:30221800-30222200 Active TSS iPS-18 Cell Line embryonic stem cell
16 chr13:30221800-30222200 Active TSS Fetal Thymus thymus
17 chr13:30221800-30222400 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr13:30221800-30223000 Active TSS Primary T cells fromperipheralblood blood
19 chr13:30222000-30222400 Flanking Active TSS HUES48 Cell Line embryonic stem cell
20 chr13:30222000-30222600 Weak transcription Primary T cells from cord blood blood
21 chr13:30222200-30222400 Enhancers H1 Cell Line embryonic stem cell
22 chr13:30222200-30222400 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
23 chr13:30222400-30222600 Active TSS HUES48 Cell Line embryonic stem cell
24 chr13:30222400-30223200 Enhancers iPS-18 Cell Line embryonic stem cell
25 chr13:30222400-30229400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr13:30222600-30223000 Enhancers Primary T cells from cord blood blood
27 chr13:30222800-30223200 Active TSS Primary T helper cells PMA-I stimulated --
28 chr13:30222800-30232800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr13:30222800-30232800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr13:30223000-30223400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
31 chr13:30223000-30223400 Active TSS Duodenum Mucosa Duodenum
32 chr13:30223200-30223400 Enhancers Primary T helper cells PMA-I stimulated --
33 chr13:30224600-30225000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr13:30224600-30225200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr13:30228000-30229200 Enhancers NHDF-Ad bronchial
36 chr13:30228000-30230000 Enhancers NHLF lung
37 chr13:30228000-30230000 Enhancers Osteobl bone
38 chr13:30228000-30230600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr13:30228200-30230000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
40 chr13:30228200-30230000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
41 chr13:30228400-30233800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
42 chr13:30229000-30229800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr13:30229200-30229600 Enhancers Muscle Satellite Cultured Cells --
44 chr13:30229200-30229800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr13:30229200-30229800 Flanking Active TSS NHDF-Ad bronchial
46 chr13:30229200-30230000 Enhancers HSMM muscle
47 chr13:30229200-30230000 Enhancers NH-A brain
48 chr13:30229400-30230000 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr13:30229800-30230800 Enhancers NHDF-Ad bronchial
50 chr13:30230000-30231000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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