Variant report

Variant	nsv522019
Chromosome Location	chr6:131017953-131019627
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BHLHE40	chr6:131019004-131019389	GM12878	blood:	n/a	n/a
2	CEBPB	chr6:131018579-131018891	IMR90	lung:	n/a	n/a
3	CTCF	chr6:131019200-131019350	AoAF	blood vessel:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
4	CTCF	chr6:131019180-131019330	NB4	blood:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
5	CTCF	chr6:131019170-131019398	Fibrobl	skin:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
6	CTCF	chr6:131019460-131019610	SK-N-SH_RA	brain:	n/a	n/a
7	CTCF	chr6:131018740-131018890	HMEC	breast:	n/a	n/a
8	CTCF	chr6:131019220-131019370	AoAF	blood vessel:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
9	CTCF	chr6:131019200-131019350	AG10803	skin:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
10	CTCF	chr6:131019059-131019403	A549	lung:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
11	CTCF	chr6:131019158-131019367	Pancreas_OC	pancreas:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
12	CTCF	chr6:131019220-131019370	GM06990	blood:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
13	CTCF	chr6:131019220-131019370	GM12867	blood:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
14	CTCF	chr6:131019147-131019400	LNCaP	prostate:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
15	CTCF	chr6:131019002-131019502	HepG2	liver:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
16	CTCF	chr6:131018874-131019590	A549	lung:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
17	CTCF	chr6:131019192-131019349	GM12891	blood:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
18	CTCF	chr6:131019200-131019350	GM12870	blood:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
19	CTCF	chr6:131019171-131019394	GM13976	blood:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
20	CTCF	chr6:131019180-131019330	HCT-116	colon:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
21	CTCF	chr6:131019149-131019411	MCF-7	breast:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
22	CTCF	chr6:131018931-131018987	Spleen_OC	spleen:	n/a	n/a
23	CTCF	chr6:131019151-131019413	K562	blood:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
24	CTCF	chr6:131019142-131019428	HUVEC	blood vessel:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
25	CTCF	chr6:131019220-131019370	AG04449	skin:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
26	CTCF	chr6:131019200-131019350	SAEC	small airway:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
27	CTCF	chr6:131018858-131019524	HCT-116	colon:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
28	CTCF	chr6:131019156-131019381	K562	blood:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
29	CTCF	chr6:131019180-131019330	HFF	foreskin:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
30	CTCF	chr6:131019191-131019350	MCF-7	breast:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
31	CTCF	chr6:131019180-131019330	WI-38	lung:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
32	CTCF	chr6:131019200-131019350	GM12873	blood:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
33	CTCF	chr6:131019220-131019370	GM12871	blood:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
34	CTCF	chr6:131019180-131019330	GM12875	blood:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
35	CTCF	chr6:131019162-131019393	GM19240	blood:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
36	CTCF	chr6:131019520-131019670	GM12872	blood:	n/a	n/a
37	CTCF	chr6:131019157-131019385	MCF-7	breast:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
38	CTCF	chr6:131019040-131019489	GM12878	blood:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
39	CTCF	chr6:131019126-131019462	T-47D	breast:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
40	CTCF	chr6:131019200-131019350	AG09309	skin:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
41	CTCF	chr6:131019120-131019270	RPTEC	kidney:	n/a	n/a
42	CTCF	chr6:131019240-131019390	HepG2	liver:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
43	CTCF	chr6:131019200-131019350	HCPEpiC	choroid plexus:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
44	CTCF	chr6:131019164-131019379	Hela-S3	cervix:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
45	CTCF	chr6:131019190-131019374	GM20000	blood:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
46	CTCF	chr6:131019240-131019390	HEK293	kidney:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
47	CTCF	chr6:131019220-131019370	HL-60	blood:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
48	CTCF	chr6:131019200-131019350	GM12801	blood:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
49	CTCF	chr6:131019180-131019330	HAc	cerebellar:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276
50	CTCF	chr6:131019156-131019386	GM12892	blood:	n/a	chr6:131019260-131019278 chr6:131019261-131019277 chr6:131019255-131019276

No.	Distal block	Cell Line	Cell type
1	chr6:130643524..130644551-chr6:131018759..131019797,15	MCF-7	breast:
2	chr6:130643796..130644450-chr6:131018869..131019419,2	MCF-7	breast:
3	chr6:131019021..131019768-chr6:131080914..131081754,2	MCF-7	breast:
4	chr6:130614261..130615556-chr6:131018820..131019730,3	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RP3-324N14.2.1-2	chr6:131018457-131018529	ENSG00000229923.2
2	lnc-RP3-324N14.2.1-2	chr6:131018457-131018529	XLOC_005462
3	lnc-RP3-324N14.2.1-2	chr6:131018662-131018923	XLOC_005462
4	lnc-RP3-324N14.2.1-2	chr6:131018663-131018923	ENSG00000229923.2

Variant related genes	Relation type
ENSG00000229923	TF binding region
ENTPD1	miRNA target sites
EP300	miRNA target sites

Extended variants
information (count: 64 )
Associated
traits (count: 79 )

Variant overlapped rSNPs/rCNVs (count:64 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs9375760	chr6:131017953-131017954	Enhancers Weak transcription	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs9492695	chr6:131018035-131018036	Enhancers Weak transcription	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs535384009	chr6:131018123-131018124	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
4	rs115283563	chr6:131018180-131018181	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
5	rs9402268	chr6:131018184-131018185	Enhancers Weak transcription	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs545877571	chr6:131018188-131018189	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
7	rs185973279	chr6:131018194-131018195	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
8	rs564070754	chr6:131018205-131018206	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
9	rs577489712	chr6:131018215-131018216	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
10	rs544852571	chr6:131018261-131018262	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
11	rs9402269	chr6:131018295-131018296	Enhancers Weak transcription	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
12	rs530389633	chr6:131018345-131018346	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
13	rs542161743	chr6:131018364-131018365	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
14	rs560456549	chr6:131018386-131018387	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
15	rs190432425	chr6:131018396-131018397	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
16	rs552619781	chr6:131018404-131018405	Enhancers Flanking Active TSS Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
17	rs570647359	chr6:131018408-131018409	Enhancers Flanking Active TSS Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
18	rs148904504	chr6:131018410-131018411	Enhancers Flanking Active TSS Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
19	rs2030023	chr6:131018421-131018422	Enhancers Flanking Active TSS Weak transcription	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs370409286	chr6:131018428-131018429	Enhancers Flanking Active TSS Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
21	rs9375761	chr6:131018434-131018435	Enhancers Flanking Active TSS Weak transcription	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs9492696	chr6:131018475-131018476	Enhancers Flanking Active TSS Weak transcription	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs369212830	chr6:131018493-131018494	Enhancers Flanking Active TSS Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
24	rs183513132	chr6:131018500-131018501	Enhancers Flanking Active TSS Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
25	rs539087975	chr6:131018515-131018516	Enhancers Flanking Active TSS Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
26	rs557869245	chr6:131018529-131018530	Enhancers Flanking Active TSS Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
27	rs188794095	chr6:131018596-131018597	Enhancers Flanking Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs2030022	chr6:131018605-131018606	Enhancers Flanking Active TSS Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs151252672	chr6:131018709-131018710	Enhancers Flanking Active TSS Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
30	rs552313074	chr6:131018714-131018715	Enhancers Flanking Active TSS Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
31	rs117906252	chr6:131018724-131018725	Enhancers Flanking Active TSS Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
32	rs77512616	chr6:131018815-131018816	Enhancers Flanking Active TSS Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
33	rs560649843	chr6:131018846-131018847	Enhancers Flanking Active TSS Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
34	rs527670016	chr6:131018861-131018862	Enhancers Flanking Active TSS Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
35	rs140464817	chr6:131018908-131018909	Enhancers Flanking Active TSS Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
36	rs564163644	chr6:131018956-131018957	Enhancers Flanking Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs531649042	chr6:131018969-131018970	Enhancers Flanking Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs193214552	chr6:131018986-131018987	Enhancers Flanking Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs567907129	chr6:131019024-131019025	Enhancers Flanking Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs529126503	chr6:131019028-131019029	Enhancers Flanking Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs114726934	chr6:131019039-131019040	Enhancers Flanking Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs182733212	chr6:131019134-131019135	Enhancers Flanking Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs571822880	chr6:131019141-131019142	Enhancers Flanking Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs564970434	chr6:131019162-131019163	Enhancers Flanking Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs200868574	chr6:131019163-131019164	Enhancers Flanking Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs1015038	chr6:131019174-131019175	Enhancers Flanking Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs539737315	chr6:131019190-131019191	Enhancers Flanking Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs557759240	chr6:131019216-131019217	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs75931244	chr6:131019237-131019238	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs186785857	chr6:131019279-131019280	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:79)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Autism	22495311	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Melanoma	18172304	CNVD
Cancer	21637783	CNVD
Colorectal cancer	16272173	CNVD
Gastric cancer	17908304	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Ependymoma	16718352	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	16272173	CNVD
Prostate cancer	18632612	CNVD
Wilms tumour	21544195	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Glioma	21046410	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Zellweger syndrome	21572526	CNVD
Follicular lymphoma	20505157	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
Lung adenocarcinoma	21935476	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	17603634	CNVD
Chondromyxoid Fibroma	20696777	CNVD
Cancer	21183584	CNVD
Developmental delay	19490664	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	21785460	CNVD
Kartagener syndrome	16639409	CNVD
Breast cancer	17133270	CNVD
Follicular lymphoma	18703704	CNVD
Neurodevelopmental disorder	22521361	CNVD
small cell lung cancer	20016488	CNVD
Adenoid cystic carcinoma	18698036	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Leukemia	18688285	CNVD
Breast cancer	21364760	CNVD
Cancer	20164919	CNVD
Brain cancer	19584924	CNVD
Uveal melanoma	20484589	CNVD

Chromatin state (count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:131014800-131018400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr6:131015400-131018400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
3	chr6:131015800-131018000	Weak transcription	Dnd41	blood
4	chr6:131015800-131019000	Weak transcription	Primary T helper cells fromperipheralblood	blood
5	chr6:131016200-131018200	Weak transcription	Primary T helper cells PMA-I stimulated	--
6	chr6:131017400-131018000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr6:131017600-131018200	Enhancers	Primary hematopoietic stem cells short term culture	blood
8	chr6:131017600-131018400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
9	chr6:131017600-131018800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr6:131017600-131019000	Enhancers	HUVEC	blood vessel
11	chr6:131017600-131019200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
12	chr6:131017600-131019200	Enhancers	Muscle Satellite Cultured Cells	--
13	chr6:131017600-131019600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
14	chr6:131017600-131019600	Enhancers	Osteobl	bone
15	chr6:131017800-131019200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
16	chr6:131017800-131019400	Enhancers	NHEK	skin
17	chr6:131017800-131019600	Enhancers	Primary T cells from cord blood	blood
18	chr6:131017800-131019600	Enhancers	NHDF-Ad	bronchial
19	chr6:131018000-131019000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
20	chr6:131018000-131019200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
21	chr6:131018000-131019600	Enhancers	Dnd41	blood
22	chr6:131018000-131020800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
23	chr6:131018200-131019000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
24	chr6:131018200-131019200	Enhancers	HMEC	breast
25	chr6:131018200-131019200	Enhancers	NHLF	lung
26	chr6:131018200-131019400	Enhancers	Primary T helper cells PMA-I stimulated	--
27	chr6:131018200-131019600	Enhancers	HUES48 Cell Line	embryonic stem cell
28	chr6:131018200-131019600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
29	chr6:131018200-131019600	Enhancers	NH-A	brain
30	chr6:131018400-131019200	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
31	chr6:131018400-131019200	Enhancers	Primary T helper naive cells from peripheral blood	blood
32	chr6:131018400-131019200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
33	chr6:131018400-131019600	Enhancers	Primary T killer memory cells from peripheral blood	blood
34	chr6:131018400-131029200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
35	chr6:131018600-131019200	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
36	chr6:131018600-131019200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
37	chr6:131018800-131019200	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
38	chr6:131019000-131019200	Enhancers	ES-WA7 Cell Line	embryonic stem cell
39	chr6:131019000-131019200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
40	chr6:131019000-131019200	Enhancers	Primary hematopoietic stem cells short term culture	blood
41	chr6:131019000-131019200	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
42	chr6:131019000-131019200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
43	chr6:131019000-131019200	Flanking Active TSS	HUVEC	blood vessel
44	chr6:131019000-131019400	Enhancers	Primary T helper cells fromperipheralblood	blood
45	chr6:131019000-131019400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
46	chr6:131019000-131019400	Enhancers	Fetal Thymus	thymus
47	chr6:131019000-131019600	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
48	chr6:131019200-131019400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
49	chr6:131019200-131019800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
50	chr6:131019200-131021200	Weak transcription	Primary hematopoietic stem cells short term culture	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links