Variant report

Variant	nsv553562
Chromosome Location	chr11:16112180-16220289
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:827)
CpG islands
(count:183)
Chromatin interactive
region (count:65)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:827 , 50 per page) page: 1 2 3 4 5 6 7 ... 17

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr11:16191230-16191468	HepG2	liver:	n/a	n/a
2	ARID3A	chr11:16207874-16207901	HepG2	liver:	n/a	n/a
3	ARID3A	chr11:16215594-16215968	K562	blood:	n/a	n/a
4	ARID3A	chr11:16147895-16148254	HepG2	liver:	n/a	n/a
5	ARID3A	chr11:16115420-16115797	HepG2	liver:	n/a	n/a
6	ARID3A	chr11:16176019-16177286	HepG2	liver:	n/a	n/a
7	ARID3A	chr11:16115705-16116236	K562	blood:	n/a	n/a
8	ARID3A	chr11:16175543-16175804	HepG2	liver:	n/a	n/a
9	ARID3A	chr11:16213058-16213194	K562	blood:	n/a	n/a
10	ARID3A	chr11:16205814-16206820	HepG2	liver:	n/a	n/a
11	ARID3A	chr11:16136351-16137590	HepG2	liver:	n/a	n/a
12	ATF1	chr11:16115625-16116318	K562	blood:	n/a	n/a
13	ATF1	chr11:16177027-16177048	K562	blood:	n/a	n/a
14	ATF1	chr11:16215396-16215970	K562	blood:	n/a	n/a
15	ATF3	chr11:16115587-16115963	K562	blood:	n/a	n/a
16	ATF3	chr11:16115992-16116318	K562	blood:	n/a	n/a
17	BACH1	chr11:16172861-16173036	K562	blood:	n/a	n/a
18	BACH1	chr11:16172745-16172982	H1-hESC	embryonic stem cell:	n/a	n/a
19	BACH1	chr11:16133367-16133545	H1-hESC	embryonic stem cell:	n/a	n/a
20	BHLHE40	chr11:16215449-16216034	K562	blood:	n/a	n/a
21	BHLHE40	chr11:16213195-16213262	K562	blood:	n/a	n/a
22	BHLHE40	chr11:16115390-16115833	HepG2	liver:	n/a	n/a
23	BHLHE40	chr11:16199289-16199544	K562	blood:	n/a	n/a
24	BHLHE40	chr11:16115508-16116227	K562	blood:	n/a	n/a
25	BRCA1	chr11:16202510-16202654	H1-hESC	embryonic stem cell:	n/a	n/a
26	CBX3	chr11:16115607-16116340	K562	blood:	n/a	n/a
27	CBX3	chr11:16127036-16127422	K562	blood:	n/a	n/a
28	CBX3	chr11:16163184-16163527	K562	blood:	n/a	n/a
29	CCNT2	chr11:16215570-16215985	K562	blood:	n/a	n/a
30	CCNT2	chr11:16199326-16199738	K562	blood:	n/a	n/a
31	CCNT2	chr11:16115857-16116243	K562	blood:	n/a	n/a
32	CCNT2	chr11:16212965-16213273	K562	blood:	n/a	n/a
33	CEBPB	chr11:16144618-16144970	A549	lung:	n/a	chr11:16144787-16144798 chr11:16144787-16144800 chr11:16144788-16144799
34	CEBPB	chr11:16199202-16199767	H1-hESC	embryonic stem cell:	n/a	n/a
35	CEBPB	chr11:16120041-16120241	HepG2	liver:	n/a	chr11:16120159-16120170 chr11:16120159-16120172
36	CEBPB	chr11:16144602-16144985	K562	blood:	n/a	chr11:16144787-16144798 chr11:16144787-16144800 chr11:16144788-16144799
37	CEBPB	chr11:16175447-16175895	Hela-S3	cervix:	n/a	n/a
38	CEBPB	chr11:16212810-16213094	IMR90	lung:	n/a	chr11:16212957-16212968
39	CEBPB	chr11:16136527-16136886	HepG2	liver:	n/a	chr11:16136703-16136714
40	CEBPB	chr11:16140072-16140226	H1-hESC	embryonic stem cell:	n/a	n/a
41	CEBPB	chr11:16215587-16215962	K562	blood:	n/a	n/a
42	CEBPB	chr11:16119992-16120871	ECC-1	luminal epithelium:	n/a	chr11:16120310-16120322 chr11:16120159-16120170 chr11:16120159-16120172
43	CEBPB	chr11:16212797-16213130	K562	blood:	n/a	chr11:16212957-16212968
44	CEBPB	chr11:16144604-16144972	IMR90	lung:	n/a	chr11:16144787-16144798 chr11:16144787-16144800 chr11:16144788-16144799
45	CEBPB	chr11:16212815-16213144	K562	blood:	n/a	chr11:16212957-16212968
46	CEBPB	chr11:16144606-16144894	HepG2	liver:	n/a	chr11:16144787-16144798 chr11:16144787-16144800 chr11:16144788-16144799
47	CEBPB	chr11:16199260-16199498	A549	lung:	n/a	n/a
48	CEBPB	chr11:16115365-16115703	HepG2	liver:	n/a	n/a
49	CEBPB	chr11:16180049-16180507	Hela-S3	cervix:	n/a	n/a
50	CEBPB	chr11:16144631-16144862	H1-hESC	embryonic stem cell:	n/a	chr11:16144787-16144798 chr11:16144787-16144800 chr11:16144788-16144799

(count:183 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:16181614-16181664	HEK293	kidney:	embryo
2	chr11:16132747-16132797	GM12878	blood:	n/a
3	chr11:16170023-16170073	AG09319	gingival:	n/a
4	chr11:16170023-16170073	SKMC	muscle:	n/a
5	chr11:16132747-16132797	GM12891	blood:	n/a
6	chr11:16170023-16170073	HL-60	blood:	n/a
7	chr11:16170023-16170073	SK-N-SH_RA	brain:	n/a
8	chr11:16181614-16181664	GM12892	blood:	n/a
9	chr11:16170023-16170073	NH-A	brain:	n/a
10	chr11:16170023-16170073	NT2-D1	testis:	n/a
11	chr11:16170023-16170073	HCM	heart:	n/a
12	chr11:16181614-16181664	HIPEpiC	eye:	n/a
13	chr11:16170023-16170073	HEK293	kidney:	embryo
14	chr11:16132747-16132797	HRPEpiC	eye:	n/a
15	chr11:16181614-16181664	HCF	heart:	n/a
16	chr11:16132747-16132797	PrEC	prostate:	n/a
17	chr11:16132747-16132797	NHDF-neo	bronchial:	n/a
18	chr11:16170023-16170073	NHBE	bronchial:	n/a
19	chr11:16181614-16181664	RPTEC	kidney:	n/a
20	chr11:16170023-16170073	ProgFib	skin:	n/a
21	chr11:16170023-16170073	SAEC	small airway:	n/a
22	chr11:16170023-16170073	Hepatocyte	liver:	n/a
23	chr11:16170023-16170073	LNCaP	prostate:	n/a
24	chr11:16132747-16132797	NHBE	bronchial:	n/a
25	chr11:16132747-16132797	HCM	heart:	n/a
26	chr11:16170023-16170073	IMR90	lung:	fetal
27	chr11:16132747-16132797	AG09309	skin:	n/a
28	chr11:16170023-16170073	PrEC	prostate:	n/a
29	chr11:16181614-16181664	NT2-D1	testis:	n/a
30	chr11:16181614-16181664	K562	blood:	n/a
31	chr11:16170023-16170073	A549	lung:	n/a
32	chr11:16181614-16181664	Hela-S3	cervix:	n/a
33	chr11:16181614-16181664	PrEC	prostate:	n/a
34	chr11:16132747-16132797	MCF-7	breast:	n/a
35	chr11:16132747-16132797	Caco-2	colon:	n/a
36	chr11:16181614-16181664	BJ	skin:	n/a
37	chr11:16132747-16132797	HCPEpiC	choroid plexus:	n/a
38	chr11:16170023-16170073	GM19239	blood:	n/a
39	chr11:16170023-16170073	K562	blood:	n/a
40	chr11:16132747-16132797	LNCaP	prostate:	n/a
41	chr11:16132747-16132797	GM12892	blood:	n/a
42	chr11:16132747-16132797	Hepatocyte	liver:	n/a
43	chr11:16132747-16132797	GM06990	blood:	n/a
44	chr11:16170023-16170073	U87	brain:	n/a
45	chr11:16170023-16170073	HRE	kidney:	n/a
46	chr11:16181614-16181664	MCF10A-Er-Src	breast:	n/a
47	chr11:16132747-16132797	HMEC	breast:	n/a
48	chr11:16132747-16132797	HL-60	blood:	n/a
49	chr11:16170023-16170073	GM06990	blood:	n/a
50	chr11:16170023-16170073	AG10803	skin:	n/a

(count:65 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr11:16213165..16216422-chr11:16216965..16220387,3	K562	blood:
2	chr11:16139840..16141518-chr11:16141967..16144362,2	K562	blood:
3	chr11:16213881..16214546-chr11:16634890..16635879,2	K562	blood:
4	chr11:16187914..16189713-chr11:16626672..16629483,2	K562	blood:
5	chr11:16174141..16177585-chr11:16182618..16186362,3	K562	blood:
6	chr11:16209269..16212267-chr11:16243598..16245269,2	K562	blood:
7	chr11:16196657..16198916-chr11:16627145..16629864,2	K562	blood:
8	chr11:16212721..16213531-chr11:16627544..16628402,2	K562	blood:
9	chr11:16174141..16177585-chr11:16182618..16186362,3	K562	blood:
10	chr11:16112771..16115921-chr11:16626623..16629918,3	K562	blood:
11	chr11:16191988..16194982-chr11:16195738..16200331,5	K562	blood:
12	chr11:16187549..16190511-chr11:16315345..16317594,2	K562	blood:
13	chr11:16141343..16143231-chr11:16172606..16175476,2	K562	blood:
14	chr11:16113669..16115556-chr11:16118737..16121207,2	K562	blood:
15	chr11:16215320..16217059-chr11:16240927..16242475,2	K562	blood:
16	chr11:16192988..16195969-chr11:16626575..16628656,2	K562	blood:
17	chr11:16192356..16194022-chr11:16198076..16200331,2	K562	blood:
18	chr11:16192356..16194022-chr11:16198076..16200331,2	K562	blood:
19	chr11:16139840..16141518-chr11:16141967..16144362,2	K562	blood:
20	chr11:16133433..16135825-chr11:16136532..16138157,2	K562	blood:
21	chr11:16153177..16156147-chr11:16157029..16158765,2	K562	blood:
22	chr11:16149823..16152232-chr11:16154074..16156532,2	K562	blood:
23	chr11:16215659..16217331-chr11:16627513..16629554,2	K562	blood:
24	chr11:16113669..16115556-chr11:16118737..16121207,2	K562	blood:
25	chr11:16178415..16182237-chr11:16182900..16185853,4	K562	blood:
26	chr11:16105376..16109497-chr11:16109885..16113446,3	MCF-7	breast:
27	chr11:16130157..16133054-chr11:16135453..16138445,2	K562	blood:
28	chr11:16134325..16135863-chr11:16136123..16138157,2	K562	blood:
29	chr11:16212554..16213580-chr11:16627486..16628319,3	MCF-7	breast:
30	chr11:16199096..16201886-chr11:16205151..16207192,2	MCF-7	breast:
31	chr11:16126529..16129039-chr11:16133053..16135485,2	K562	blood:
32	chr11:16212664..16213531-chr11:16634934..16635871,3	K562	blood:
33	chr11:16171743..16174574-chr11:16176679..16178983,2	MCF-7	breast:
34	chr11:16139840..16141627-chr11:16142397..16144362,2	K562	blood:
35	chr11:16127568..16130193-chr11:16134623..16137035,2	K562	blood:
36	chr11:16147074..16149569-chr11:16151247..16152894,2	K562	blood:
37	chr11:16110793..16113422-chr11:16114334..16116198,3	K562	blood:
38	chr11:16110793..16113422-chr11:16114334..16116198,3	K562	blood:
39	chr11:16139840..16141627-chr11:16142397..16144362,2	K562	blood:
40	chr11:16147074..16149569-chr11:16151247..16152894,2	K562	blood:
41	chr11:16118808..16121567-chr11:16157087..16159349,2	K562	blood:
42	chr11:16134325..16135863-chr11:16136123..16138157,2	K562	blood:
43	chr11:16141343..16143231-chr11:16172606..16175476,2	K562	blood:
44	chr11:16206684..16208896-chr11:16625530..16628069,2	K562	blood:
45	chr11:16196933..16198916-chr11:16627145..16629700,2	K562	blood:
46	chr11:16118808..16121567-chr11:16157087..16159349,2	K562	blood:
47	chr11:16149823..16152232-chr11:16154074..16156532,2	K562	blood:
48	chr11:16191988..16194982-chr11:16195738..16200331,5	K562	blood:
49	chr11:16171743..16174574-chr11:16176679..16178983,2	MCF-7	breast:
50	chr11:16116317..16118652-chr11:16120891..16122652,2	K562	blood:

No data

Variant related genes	Relation type
ENSG00000221556	TF binding region
SOX6	TF binding region
ENSG00000221556	CpG island
SOX6	CpG island
ENSG00000110693	chromatin interactions

Extended variants
information (count: 3561 )
Associated
traits (count: 59 )

Variant overlapped rSNPs/rCNVs (count:3561 , 50 per page) page: 1 2 3 4 5 6 7 ... 72

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs11023843	chr11:16112180-16112181	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs549288941	chr11:16112181-16112182	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs560186228	chr11:16112183-16112184	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs367554808	chr11:16112192-16112193	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs527394626	chr11:16112249-16112250	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs190405293	chr11:16112315-16112316	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs74799219	chr11:16112331-16112332	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs146744251	chr11:16112337-16112338	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs116837353	chr11:16112399-16112400	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs117779452	chr11:16112402-16112403	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs568498432	chr11:16112428-16112429	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs538069798	chr11:16112448-16112449	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs181547490	chr11:16112486-16112487	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs185812483	chr11:16112508-16112509	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs369077100	chr11:16112528-16112529	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs550025359	chr11:16112554-16112555	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs190143285	chr11:16112564-16112565	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs559077762	chr11:16112568-16112569	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs577294485	chr11:16112574-16112575	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs568309391	chr11:16112600-16112601	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs544677047	chr11:16112617-16112618	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs200113387	chr11:16112635-16112636	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs180937798	chr11:16112746-16112747	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs574881813	chr11:16112787-16112788	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs199650726	chr11:16112788-16112789	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs561177181	chr11:16112790-16112791	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs77348652	chr11:16112808-16112809	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs553887308	chr11:16112911-16112912	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs546499776	chr11:16112949-16112950	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs56013327	chr11:16112963-16112964	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs532145622	chr11:16113005-16113006	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs117127594	chr11:16113013-16113014	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs140400903	chr11:16113122-16113123	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs535851639	chr11:16113125-16113126	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs570106912	chr11:16113203-16113204	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs547748334	chr11:16113226-16113227	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs566842242	chr11:16113233-16113234	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs534482798	chr11:16113243-16113244	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs376043752	chr11:16113250-16113251	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs558919542	chr11:16113269-16113270	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs539122523	chr11:16113288-16113289	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs537999811	chr11:16113308-16113309	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs75730566	chr11:16113314-16113315	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs556697527	chr11:16113365-16113366	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs144164371	chr11:16113382-16113383	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs542260547	chr11:16113482-16113483	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs75924346	chr11:16113493-16113494	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs539567270	chr11:16113530-16113531	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs557896331	chr11:16113563-16113564	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs573083843	chr11:16113578-16113579	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:59)

Disease	PMID	Source
Cancer	21183584	CNVD
Gastric adenocarcinoma	19115996	CNVD
Hepatocellular carcinoma	16750200	CNVD
Burkitt''s lymphoma	19759907	CNVD
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Thyroid cancer	19087340	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Wilms tumour	21544195	CNVD
Parathyroid adenoma	22454399	CNVD
Chordoma	21602918	CNVD
Breast cancer	21949216	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	19222835	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Beckwith-Wiedemann syndrome	21518781	CNVD
Wilms tumour	21518781	CNVD
Hepatoblastoma	21518781	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastric cancer	17908304	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
small cell lung cancer	20016488	CNVD
Autism	22495311	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Multiple myeloma	16461302	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Neuroblastoma	19435921	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Breast cancer	17133270	CNVD
Breast cancer	21858162	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Breast cancer	21785460	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Myelofibrosis	22110671	CNVD
Neuroblastoma	21899760	CNVD
Lung adenocarcinoma	17086460	CNVD
Urothelial cell carcinoma	18451213	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Lung cancer	17086460	CNVD
Uterine serous papillary cancer	19536090	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD

Chromatin state (count:1011 , 50 per page) page: 1 2 3 4 5 6 7 ... 21

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:16083200-16116000	Weak transcription	Fetal Intestine Large	intestine
2	chr11:16089400-16117400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr11:16097000-16115600	Weak transcription	Psoas Muscle	Psoas
4	chr11:16098600-16137000	Weak transcription	Pancreas	Pancrea
5	chr11:16104600-16114400	Weak transcription	Liver	Liver
6	chr11:16104800-16112600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr11:16108200-16112600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr11:16108200-16113800	Weak transcription	Brain Germinal Matrix	brain
9	chr11:16108200-16114200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr11:16108400-16112600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr11:16108400-16118400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
12	chr11:16108800-16112600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
13	chr11:16112000-16112200	Enhancers	Cortex derived primary cultured neurospheres	brain
14	chr11:16112000-16112800	Weak transcription	Pancreatic Islets	Pancreatic Islet
15	chr11:16112200-16112600	Weak transcription	Cortex derived primary cultured neurospheres	brain
16	chr11:16112600-16113000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr11:16112600-16113000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr11:16112600-16113200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
19	chr11:16112600-16113200	Enhancers	Cortex derived primary cultured neurospheres	brain
20	chr11:16112600-16113600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
21	chr11:16112600-16114200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
22	chr11:16112800-16113200	Enhancers	iPS-18 Cell Line	embryonic stem cell
23	chr11:16112800-16113400	Enhancers	Pancreatic Islets	Pancreatic Islet
24	chr11:16112800-16114200	Enhancers	Muscle Satellite Cultured Cells	--
25	chr11:16113000-16119200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
26	chr11:16113200-16114200	Weak transcription	Fetal Kidney	kidney
27	chr11:16113200-16114600	Weak transcription	Cortex derived primary cultured neurospheres	brain
28	chr11:16113400-16114400	Weak transcription	Pancreatic Islets	Pancreatic Islet
29	chr11:16113600-16114000	Enhancers	NHEK	skin
30	chr11:16113600-16114200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
31	chr11:16113600-16117600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
32	chr11:16113800-16114000	Enhancers	Brain Germinal Matrix	brain
33	chr11:16114000-16114600	Weak transcription	Brain Germinal Matrix	brain
34	chr11:16114000-16116200	Weak transcription	NHEK	skin
35	chr11:16114200-16114800	Enhancers	Fetal Kidney	kidney
36	chr11:16114200-16115400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
37	chr11:16114200-16116800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
38	chr11:16114200-16117400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
39	chr11:16114200-16117600	Weak transcription	Muscle Satellite Cultured Cells	--
40	chr11:16114400-16115600	Enhancers	Liver	Liver
41	chr11:16114400-16115600	Enhancers	Pancreatic Islets	Pancreatic Islet
42	chr11:16114400-16116000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
43	chr11:16114600-16114800	Enhancers	Brain Germinal Matrix	brain
44	chr11:16114600-16114800	Enhancers	Fetal Heart	heart
45	chr11:16114600-16115400	Enhancers	Skeletal Muscle Male	skeletal muscle
46	chr11:16114600-16115600	Enhancers	Cortex derived primary cultured neurospheres	brain
47	chr11:16114600-16116400	Enhancers	HepG2	liver
48	chr11:16114600-16117000	Enhancers	K562	blood
49	chr11:16114800-16115600	Weak transcription	Fetal Heart	heart
50	chr11:16114800-16116000	Weak transcription	Fetal Kidney	kidney

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links